Rv3596c - c.177G>C
Drug resistance types
35 Sensitive
8 RR-TB
127 HR-TB
16 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
98 Other
lineage Counts
| lineage | Count |
|---|---|
| 134 | |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 2 |
| lineage2.2.1 | 14 |
| lineage4.9 | 42 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4 | 9 |
| lineage4.1.1.3 | 1 |
| lineage3 | 6 |
| lineage4;lineage1.1.2 | 1 |
| lineage2.2 | 2 |
| La1.8.1 | 6 |
| lineage4;lineage1.1 | 1 |
| lineage4.1.2.1 | 15 |
| lineage3.1 | 3 |
| lineage1.1 | 1 |
| lineage4.8 | 4 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.3 | 2 |
| lineage6.1.1 | 2 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage2 | 3 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage6 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 287 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176751 | HR-TB | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675502 | Other | None | SRR3675456 | HR-TB | None | ERR4816999 | Other | None | SRR3675550 | Other | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675571 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4818615 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818929 | HR-TB | None | SRR5007188 | Other | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | ERR4821053 | Other | lineage3 | None | SRR5341333 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6044790 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045233 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323036 | HR-TB | None | ERR294266 | HR-TB | None | SRR6896147 | Sensitive | lineage4.8 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | SRR7496509 | Other | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496517 | Other | None | SRR7535086 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323041 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283036 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3439432 | Other | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468544 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797069 | Other | None | ERR3797043 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR4188350 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4188247 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796577 | MDR-TB | None | ERR4798406 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798504 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR5336148 | Other | None | ERR6358991 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736839 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR736867 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787197 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9787165 | Other | lineage6 | None | SRR1167384 | Other | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173400 | Other | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175074 | MDR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR13837762 | Sensitive | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR12416824 | HR-TB | None | SRR13861322 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR17658565 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR19303884 | HR-TB | None |
|---|
