EBG00000313339 - n.176_177insT
Drug resistance types
52 Sensitive
17 RR-TB
15 HR-TB
19 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 64 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2 | 1 |
| lineage3 | 9 |
| lineage4.2.2.1 | 1 |
| lineage2.2.1 | 17 |
| lineage4.1.3 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 5 |
| lineage4.3.3 | 1 |
| La3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.2.1 | 1 |
| La1.8.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4 | 5 |
| La1.3 | 8 |
| lineage4.9;La1.3 | 2 |
| lineage6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR2100537 | Sensitive | lineage3 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR228180 | Sensitive | lineage3 | None | ERR228175 | Sensitive | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819952 | Sensitive | La3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046385 | Other | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829068 | MDR-TB | lineage2.2.1 | ng | ERR4829165 | Sensitive | lineage4.9 | ng | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769551 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4798855 | Sensitive | lineage3 | in | ERR4799789 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR9787336 | Other | lineage6 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None |
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