Rv3596c - c.1014G>C


Drug resistance types
81 Sensitive 24 RR-TB 36 HR-TB 17 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 47 Other
lineage Counts
lineage Count
lineage2.2.1 19
lineage4 22
lineage4.4 1
25
lineage2.2.1.1 1
La1.7.1 2
lineage4.9 53
lineage4.8 38
lineage3 7
lineage4;lineage2 1
lineage4.2.2.2 1
lineage4.1.2.1 6
lineage4.7 4
lineage4.1.1.2 1
La1.2.BCG 1
lineage3.1.1 1
lineage4.3.3 2
lineage4.1.2 1
lineage4.8.1 1
lineage4.9.1 1
lineage2.2 3
La1.8.1 2
lineage4.2.2.1 1
La1.3 3
lineage4.9;La1.3 1
lineage1.1.2 1
lineage4.3.4 1
lineage4.3.4.1 1
lineage4.1.1.3 1
lineage6 1
lineage4.4.1.1 1
lineage4.8;lineage4.3.3 4
lineage4.6.1.1 1
lineage4.6.1 2
La1.6 1
lineage4.3.4.2.1 1
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage2 1
lineage1.1.3.1 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16156697 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR16627752 RR-TB lineage4.4 None
SRR16156832 RR-TB None
SRR18909918 Other lineage2.2.1.1 None
SRR22424765 MDR-TB lineage4 None
SRR21469201 Other La1.7.1 None
SRR21677886 Sensitive lineage4.9 None
ERR176779 HR-TB None
ERR176778 HR-TB None
ERR4815310 Other None
SRR3675488 HR-TB None
SRR3105762 HR-TB None
SRR3675222 Other None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4814690 Sensitive lineage2.2.1 None
ERR181824 HR-TB lineage4 None
ERR4815550 Other lineage4 None
ERR4815524 HR-TB None
ERR2179857 RR-TB lineage4 None
ERR176651 HR-TB None
ERR181887 HR-TB None
SRR3675501 HR-TB None
ERR2229745 HR-TB lineage4.8 None
ERR2229728 Sensitive lineage4.8 dk
ERR4815909 Other lineage4.8 None
ERR2229040 Sensitive lineage4 None
ERR2229241 Other lineage4.8 None
ERR2229046 Sensitive lineage4.8 dk
ERR212125 HR-TB lineage4 None
ERR2229156 Sensitive lineage4.8 None
ERR4816470 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
ERR2229078 Sensitive lineage4.8 None
ERR2229104 Sensitive lineage4.8 None
ERR2229588 Sensitive lineage4.8 None
ERR2229150 Sensitive lineage4.8 dk
ERR2229805 Sensitive lineage4.8 dk
ERR216965 HR-TB lineage4.9 None
ERR2229628 Sensitive lineage4.8 None
ERR2229311 Sensitive lineage4.8 None
ERR2229630 Sensitive lineage4.8 None
ERR2229322 Sensitive lineage4.8 None
ERR2229403 Sensitive lineage4.8 None
ERR2229381 Sensitive lineage4.8 None
ERR2229387 Sensitive lineage4.8 None
ERR2229332 RR-TB lineage4.8 None
ERR4817204 RR-TB lineage4.9 None
ERR2229382 Sensitive lineage4.8 None
ERR2229411 Sensitive lineage4 None
ERR2229393 Other lineage4.8 None
ERR2229410 Sensitive lineage4.8 None
ERR2229406 Other lineage4.8 None
ERR2229462 Other lineage4.8 None
ERR4816762 Other lineage4;lineage2 None
ERR2229698 RR-TB lineage4.8 None
ERR2229438 Sensitive lineage4.8 None
ERR2229701 Sensitive lineage4.8 None
ERR2229492 Sensitive lineage4.8 None
ERR2229456 Sensitive lineage4.8 dk
ERR2229477 Sensitive lineage4.8 None
ERR2228819 RR-TB lineage4.8 None
ERR2229506 Sensitive lineage4.8 None
ERR2513054 Other lineage4.2.2.2 None
ERR2229521 Sensitive lineage4.8 None
ERR2229720 Other lineage4.8 None
ERR4818668 Sensitive lineage4.1.2.1 None
ERR2229726 Sensitive lineage4.8 None
ERR2228902 Sensitive lineage4 None
ERR4817987 Other lineage4.7 None
ERR2432997 Other lineage4.8 None
SRR5535715 HR-TB lineage2.2.1 None
ERR4818936 Other lineage4.1.2.1 None
ERR2513632 Sensitive lineage4.7 None
SRR5341400 HR-TB lineage4 None
ERR4819462 Other lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
ERR4819863 RR-TB lineage4.9 None
SRR5341313 HR-TB None
ERR2514869 Other lineage3 None
SRR5341315 Sensitive None
ERR2514977 Sensitive lineage3 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818908 Other La1.2.BCG None
ERR4818396 Sensitive lineage4.1.2.1 None
ERR4818536 Other lineage4.9 None
ERR2513317 Sensitive lineage4.8 gb
SRR5341373 HR-TB lineage4 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
SRR6046210 Other lineage4 None
ERR4821172 RR-TB lineage4.9 None
ERR4821946 Sensitive lineage2.2.1 gb
SRR6045191 Sensitive lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044876 Sensitive lineage4 None
SRR6257066 MDR-TB lineage4.3.3 None
SRR6045399 Other None
ERR4830353 Other None
ERR502470 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR7496471 Sensitive None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR7496523 Other lineage4.7 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323045 HR-TB None
DRR184982 RR-TB lineage2.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR036207 Other lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR1063859 HR-TB None
ERR1063858 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063862 HR-TB None
ERR3283006 RR-TB lineage4.9 None
ERR4028196 Sensitive lineage4.9 None
ERR3445503 HR-TB None
ERR3468488 RR-TB La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400529 Other lineage3 None
ERR4407557 Pre-XDR-TB lineage4.2.2.1 None
ERR4596910 Sensitive lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR7821163 Other lineage2.2.1 None
ERR4769474 HR-TB lineage4 None
ERR4769516 Other La1.3 None
ERR4769521 HR-TB None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR736875 HR-TB lineage4 None
ERR4796929 Sensitive lineage4 None
ERR6358991 HR-TB None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR9285855 Sensitive lineage4.3.4.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1002693 MDR-TB lineage4.3.3 None
ERR987707 MDR-TB lineage4.7 None
ERR9787336 Other lineage6 None
SRR10272564 Sensitive lineage4.4.1.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062895 Other lineage4.6.1.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062937 HR-TB lineage4.6.1 None
SRR1062928 RR-TB lineage4 None
SRR1172717 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1140586 HR-TB lineage4.9 None
SRR10808805 Sensitive None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140627 Other lineage4.6.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181368 Other lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972240 MDR-TB lineage2.2.1 None
SRR11972257 Other lineage4 None
SRR11972392 MDR-TB lineage2.2.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972158 MDR-TB lineage2.2 None
SRR11972166 Sensitive lineage1.1.3.1 None
SRR11972256 Pre-XDR-TB lineage2.2.1 None
SRR12199469 Sensitive lineage1.1.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR13986566 Other La1.7.1 None
SRR14088354 Sensitive lineage3 None
SRR14088362 Sensitive lineage3 None