EBG00000313339 - n.158T>C


Drug resistance types
55 Sensitive 16 RR-TB 25 HR-TB 32 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 41 Other
lineage Counts
lineage Count
13
lineage4.9 60
lineage4.3.4.2.1 5
lineage4.6.1.2 7
lineage4.1.3 1
lineage4.5 1
lineage4.3.3 6
lineage3 7
La3 1
lineage4.8 6
lineage2.2.1 11
lineage4.8.1 1
lineage4.3.4.2 6
lineage4.3.4.1 4
lineage4.3.4.2;lineage4.3.3 1
lineage4.1.2.1 12
lineage4.3.2 3
lineage4.4.1.2 1
lineage4.1.1 1
lineage4 1
lineage4.1.1.3 1
lineage1.2.2.2 1
lineage4.1.2 2
lineage4.6.1.2;lineage4.3.3 1
lineage4.3 1
lineage4.6.2 1
La1.8.1 2
lineage4.6.2.2 2
La1.3 8
lineage4.9;La1.3 2
La1 1
lineage1.2.1.2.1 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.9;lineage2.2 1
lineage2.2 1
lineage4.4.1.1.1 1
lineage2 1
lineage1.1.1 1
lineage4.2.2.1 1
spoligotype Counts
spoligotype Count
None 178
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675222 Other None
SRR3675509 Other lineage4.9 None
SRR3675501 HR-TB None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR176740 HR-TB None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR2124081 MDR-TB lineage4.6.1.2 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4816548 MDR-TB lineage4.5 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR216965 HR-TB lineage4.9 None
ERR216978 Sensitive lineage4.3.4.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4817915 RR-TB lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR228180 Sensitive lineage3 None
ERR4819952 Sensitive La3 None
ERR2513924 RR-TB lineage4.8 None
ERR4819383 RR-TB lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
SRR6045519 HR-TB None
ERR4821172 RR-TB lineage4.9 None
SRR6045233 HR-TB None
SRR6045832 HR-TB lineage4.9 None
SRR6046460 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046362 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046397 Other None
ERR2851356 Sensitive lineage4.9 None
ERR4829495 Sensitive lineage4.3.3 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
SRR6855695 Sensitive lineage4.8 None
SRR9971112 Other lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
ERR027293 Other None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR037234 Sensitive lineage4.9 None
ERR1035296 HR-TB lineage4.9 br
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
ERR1034911 MDR-TB lineage4.3.4.2;lineage4.3.3 pt
ERR1035293 MDR-TB lineage4.3.4.2 br
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR1035301 MDR-TB lineage4.3.2 br
ERR1035300 HR-TB lineage4.1.2.1 br
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR1035317 RR-TB lineage4.3.4.2 br
ERR1035316 MDR-TB lineage4.3.2 br
ERR1035318 Pre-XDR-TB lineage4.3.4.1 br
ERR1035353 MDR-TB lineage4.4.1.2 br
ERR1035354 MDR-TB lineage4.1.1 br
ERR1063855 Other lineage4 None
ERR1213866 RR-TB lineage4.1.2.1 br
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1213870 MDR-TB lineage4.3.4.2 None
ERR1213867 Other lineage4.3.4.2 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR1213874 MDR-TB lineage2.2.1 kr
ERR1213875 Other lineage4.3.3 de
ERR1213889 MDR-TB lineage4.3.4.2.1 rw
ERR1213899 Other lineage4.1.1.3 pe
ERR1213884 Sensitive lineage1.2.2.2 np
ERR1213917 Sensitive lineage3 pk
ERR1213900 RR-TB lineage4.1.2.1 pe
ERR1213913 Sensitive lineage4.1.2 de
ERR1213911 Sensitive lineage4.3.4.2 es
ERR1213931 MDR-TB lineage4.6.1.2;lineage4.3.3 pe
ERR1213920 HR-TB lineage4.1.2 None
ERR1213919 MDR-TB lineage4.3 None
ERR1213915 Other lineage4.6.2 None
ERR1213928 MDR-TB lineage4.3.3 pe
ERR1213930 Other lineage4.3.2 pe
ERR1213938 Other lineage4.1.2.1 pe
ERR1213937 Sensitive lineage4.1.2.1 pe
ERR3797043 HR-TB None
ERR3468488 RR-TB La1.8.1 None
ERR3283058 Other lineage4.9 None
ERR3439441 Other La1.8.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR400529 Other lineage3 None
ERR4769406 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769527 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4798262 HR-TB La1 None
ERR4769546 Other La1.3 None
ERR4769551 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6336691 Other lineage1.2.1.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR736837 Other lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1140724 HR-TB lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1173740 Other None
SRR1173788 Other None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173185 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180406 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1184329 MDR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR2100532 Sensitive lineage3 None
SRR2100537 Sensitive lineage3 None
SRR16157123 Other lineage4.9 None
SRR3675488 HR-TB None