EBG00000313339 - n.158T>C


Drug resistance types
53 Sensitive 10 RR-TB 18 HR-TB 26 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage4.9 56
M.canetti;lineage4.9 2
La1.7;lineage4.9 2
lineage2.2.1;lineage4.9 2
La1.2.BCG 1
La1.3 4
lineage4.8 4
lineage3 3
lineage4.3.2 3
lineage4.1.2.1 8
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.2.2.2 1
lineage4.3.4.1 4
lineage2.2.1 7
lineage4.6.1.2 6
La1.7 1
lineage4.3.4.2.1 4
lineage4.4.1.1.1 1
lineage4.3.4.2 4
lineage2;lineage4.9 1
lineage4.3.3 4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.3.3;lineage4.3.4.2 1
lineage3;lineage4 1
lineage2.2.1;lineage4.1.2.1 1
lineage1.1.1 1
lineage4.6.2.2 2
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.1.1 1
La1;lineage4.9 1
lineage4.4.1.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.1.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage2.2.1;lineage4 1
lineage4.8.1 1
lineage4.1.3 1
lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 142
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175512 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR176740 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4769555 Sensitive La1.3 None
SRR9971046 MDR-TB lineage4.8 None
ERR228175 Sensitive lineage3 None
ERR1035301 MDR-TB lineage4.3.2 br
ERR1035300 HR-TB lineage4.1.2.1 br
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1213884 Other lineage1.2.2.2 np
SRR1180410 Sensitive lineage4.9 None
ERR1035318 Pre-XDR-TB lineage4.3.4.1 br
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1180250 Other lineage4.9 None
SRR3675222 Other La1.7 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
SRR1181403 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
ERR1213911 Sensitive lineage4.3.4.2 es
SRR1180391 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR176741 Other lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR1035297 MDR-TB lineage4.3.4.1 br
SRR3675461 RR-TB lineage4.9 None
SRR3675389 Other lineage4.9 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
ERR1035293 MDR-TB lineage4.3.4.2 br
ERR3797043 Sensitive lineage4.9 None
ERR1035316 MDR-TB lineage4.3.2 br
ERR4769552 Sensitive La1.3 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR4769516 Sensitive lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR1180399 Sensitive lineage4.9 None
SRR9971113 Other lineage2.2.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR1180413 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1181402 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR10808730 Other lineage4.9 None
ERR1213889 MDR-TB lineage4.3.4.2.1 rw
ERR1035317 RR-TB lineage4.3.4.2 br
ERR3801503 Sensitive lineage4.6.2.2 None
SRR1180312 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1175513 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1180345 Other lineage4.9 None
ERR1213874 MDR-TB lineage2.2.1 kr
SRR3675492 Other La1.7;lineage4.9 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180148 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR1213930 Other lineage4.3.2 pe
SRR1180319 Sensitive lineage4.9 None
ERR1035354 MDR-TB lineage4.1.1 br
ERR9786711 Sensitive lineage4.6.2.2 None
ERR1213900 RR-TB lineage4.1.2.1 pe
SRR11342634 MDR-TB lineage4.8 None
SRR6046259 Sensitive lineage4.9 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR3283018 HR-TB lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR2100532 Sensitive lineage3 None
ERR4769514 Other La1.3 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR1035299 MDR-TB lineage4.1.2.1 br
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1181368 Other lineage4.9 None
SRR1173281 Other lineage3 None
SRR1180355 Sensitive lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR1035353 MDR-TB lineage4.4.1.2 br
ERR3806850 HR-TB lineage4.1.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045832 Other lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR502481 RR-TB lineage4.9 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
SRR1180444 Sensitive lineage4.9 None
ERR1213899 Other lineage4.1.1.3 pe
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4769408 Other La1.3 None
ERR1035295 MDR-TB lineage4.1.2.1 br
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR216965 Sensitive lineage4.9 None
ERR1035294 MDR-TB lineage4.1.2.1 br
SRR9971150 RR-TB lineage4.8.1 None
ERR2124081 MDR-TB lineage4.6.1.2 None
ERR1063855 Other lineage4.9 None
SRR29097058 Other lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR6044942 HR-TB lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
ERR1213928 MDR-TB lineage4.3.3 pe
ERR1035296 HR-TB lineage4.9 br
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None