EBG00000313339 - n.158T>C


Drug resistance types
48 Sensitive 10 RR-TB 18 HR-TB 26 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.3.3 4
lineage4.9 52
La1.7;lineage4.9 2
lineage4.6.1.2 5
La1.3 4
lineage4.6.2.2 2
lineage4.4.1.2 1
lineage4.1.2.1 8
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1;lineage4.9 2
lineage4.3.4.1 4
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.8 3
lineage4.3.2 3
lineage4.1.1 1
lineage2.2.1 5
lineage4.3.4.2 4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.1;lineage4 1
lineage4.1.3 1
La1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 2
La1.7 1
lineage4.3.3;lineage4.3.4.2 1
lineage3 3
lineage4.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.2.2.2 1
lineage2;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage1.1.1 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.3.4.2.1 4
lineage4.1.2.1;lineage4.4.1 1
La1.2.BCG 1
lineage4.4.1.1.1 1
lineage4.1.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage4 1
lineage3;lineage4 1
spoligotype Counts
spoligotype Count
None 134
Geographic prevalence
Country level data for this variant is available for 28 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1213875 Sensitive lineage4.3.3 de
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR2124081 MDR-TB lineage4.6.1.2 None
SRR1175513 Sensitive lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR1035353 MDR-TB lineage4.4.1.2 br
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1180413 Sensitive lineage4.9 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR3283018 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR1181368 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR1035316 MDR-TB lineage4.3.2 br
ERR1035354 MDR-TB lineage4.1.1 br
ERR1213874 MDR-TB lineage2.2.1 kr
ERR4769408 Other La1.3 None
ERR1035317 RR-TB lineage4.3.4.2 br
ERR1035296 HR-TB lineage4.9 br
ERR2124083 HR-TB lineage4.6.1.2 None
SRR1181402 Sensitive lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR1063855 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR1213928 MDR-TB lineage4.3.3 pe
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR1035301 MDR-TB lineage4.3.2 br
SRR9971112 HR-TB lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
SRR10808730 Other lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR2100532 Sensitive lineage3 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR1035318 Pre-XDR-TB lineage4.3.4.1 br
SRR1181403 Other lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1180375 Sensitive lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1180420 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1184021 Sensitive lineage4.9 None
ERR1213900 RR-TB lineage4.1.2.1 pe
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1181351 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1181283 Sensitive lineage4.9 None
ERR1213884 Other lineage1.2.2.2 np
ERR1213930 Other lineage4.3.2 pe
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR1173281 Other lineage3 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR108125 RR-TB lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR6046385 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1213911 Sensitive lineage4.3.4.2 es
ERR502481 RR-TB lineage4.9 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
ERR1213899 Other lineage4.1.1.3 pe
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1213889 MDR-TB lineage4.3.4.2.1 rw
SRR3675492 Other La1.7;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR176741 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR228175 Sensitive lineage3 None
SRR1175487 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4769514 Other La1.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1035293 MDR-TB lineage4.3.4.2 br
ERR502478 RR-TB lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR1173740 Other lineage3;lineage4 None