EBG00000313339 - n.158T>C
Drug resistance types
55 Sensitive
16 RR-TB
25 HR-TB
32 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| 13 | |
| lineage4.9 | 60 |
| lineage4.3.4.2.1 | 5 |
| lineage4.6.1.2 | 7 |
| lineage4.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.3 | 6 |
| lineage3 | 7 |
| La3 | 1 |
| lineage4.8 | 6 |
| lineage2.2.1 | 11 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2 | 6 |
| lineage4.3.4.1 | 4 |
| lineage4.3.4.2;lineage4.3.3 | 1 |
| lineage4.1.2.1 | 12 |
| lineage4.3.2 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.6.1.2;lineage4.3.3 | 1 |
| lineage4.3 | 1 |
| lineage4.6.2 | 1 |
| La1.8.1 | 2 |
| lineage4.6.2.2 | 2 |
| La1.3 | 8 |
| lineage4.9;La1.3 | 2 |
| La1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 34 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675222 | Other | None | SRR3675509 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176740 | HR-TB | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | ERR4819952 | Sensitive | La3 | None | ERR2513924 | RR-TB | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6045519 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829495 | Sensitive | lineage4.3.3 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR027293 | Other | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR037234 | Sensitive | lineage4.9 | None | ERR1035296 | HR-TB | lineage4.9 | br | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR1034911 | MDR-TB | lineage4.3.4.2;lineage4.3.3 | pt | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035318 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035353 | MDR-TB | lineage4.4.1.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR1063855 | Other | lineage4 | None | ERR1213866 | RR-TB | lineage4.1.2.1 | br | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1213870 | MDR-TB | lineage4.3.4.2 | None | ERR1213867 | Other | lineage4.3.4.2 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1213875 | Other | lineage4.3.3 | de | ERR1213889 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213899 | Other | lineage4.1.1.3 | pe | ERR1213884 | Sensitive | lineage1.2.2.2 | np | ERR1213917 | Sensitive | lineage3 | pk | ERR1213900 | RR-TB | lineage4.1.2.1 | pe | ERR1213913 | Sensitive | lineage4.1.2 | de | ERR1213911 | Sensitive | lineage4.3.4.2 | es | ERR1213931 | MDR-TB | lineage4.6.1.2;lineage4.3.3 | pe | ERR1213920 | HR-TB | lineage4.1.2 | None | ERR1213919 | MDR-TB | lineage4.3 | None | ERR1213915 | Other | lineage4.6.2 | None | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR1213930 | Other | lineage4.3.2 | pe | ERR1213938 | Other | lineage4.1.2.1 | pe | ERR1213937 | Sensitive | lineage4.1.2.1 | pe | ERR3797043 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283058 | Other | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR400529 | Other | lineage3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4798262 | HR-TB | La1 | None | ERR4769546 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6336691 | Other | lineage1.2.1.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1173788 | Other | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2100537 | Sensitive | lineage3 | None | SRR16157123 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None |
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