EBG00000313339 - n.509G>A
Drug resistance types
44 Sensitive
5 RR-TB
1 HR-TB
15 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 1 |
| lineage4.8 | 4 |
| lineage2.2.1 | 13 |
| La1.8.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.9 | 35 |
| lineage4.1.2.1 | 4 |
| lineage4.3.4.2 | 2 |
| La1.3 | 7 |
| lineage4.9;La1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage3 | 5 |
| La1.7.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818683 | Sensitive | lineage3.1.1 | dj | ERR4829746 | Sensitive | lineage4.8 | it | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR5087596 | Other | La1.8.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR036207 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR1213933 | Sensitive | lineage4.1.2.1 | pe | ERR3838815 | MDR-TB | lineage4.3.4.2 | None | ERR330711 | Sensitive | lineage2.2.1 | None | ERR4769514 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR5917746 | MDR-TB | lineage2.2.1 | by | ERR4769555 | Other | La1.3 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9030293 | Sensitive | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR15901697 | MDR-TB | lineage2.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR18002886 | MDR-TB | lineage2.2.1 | None | SRR18213849 | Sensitive | lineage2.2.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2101149 | Sensitive | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR228175 | Sensitive | lineage3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4817434 | Other | lineage3 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR228180 | Sensitive | lineage3 | None | ERR2513656 | Pre-XDR-TB | lineage4.3.4.2 | gb | ERR4817556 | Sensitive | lineage4.2.2.2 | None |
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