EBG00000313339 - n.637_650delCCTCTCCGGAGGAG
Drug resistance types
3 Sensitive
3 RR-TB
1 HR-TB
1 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage4.3.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.3 | 3 |
| lineage4.9 | 8 |
| lineage4.1.2.1 | 7 |
| lineage4.3.2.1 | 1 |
| lineage4.8 | 3 |
| lineage4.7 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446509 | Other | lineage3 | nl | ERR4818272 | Other | lineage4.3.2 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4818583 | Other | lineage4.3.3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514328 | Sensitive | lineage4.1.2.1 | gb | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR19304094 | Other | lineage6 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816270 | Other | lineage4.1.2.1 | None |
|---|
