Rv0668 - c.1059G>T
Drug resistance types
24 Sensitive
59 RR-TB
53 HR-TB
28 MDR-TB
32 Pre-XDR-TB
1 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 33 |
| 14 | |
| lineage4.9 | 100 |
| lineage4 | 7 |
| lineage3 | 5 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 1 |
| lineage2.2 | 22 |
| lineage4.3.3 | 1 |
| lineage2.2.2 | 18 |
| lineage2.2.1.1 | 6 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.2.1.1 | 1 |
| La1.4 | 1 |
| lineage4.8 | 2 |
| La1.7.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 224 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR1034634 | HR-TB | None | ERR323068 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR400336 | Sensitive | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4188222 | MDR-TB | La1.8.1 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013599 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013617 | MDR-TB | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048982 | HR-TB | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1175473 | Other | lineage4.9 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861214 | Other | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861456 | Sensitive | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861650 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR14782163 | HR-TB | lineage4.2.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR21469201 | Other | La1.7.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816417 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR3675571 | HR-TB | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SRR6046250 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR2514552 | Sensitive | lineage3 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR4821616 | Other | lineage1.1.3.1 | None |
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