EBG00000313325 - n.586G>A
Drug resistance types
24 Sensitive
7 RR-TB
24 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| 12 | |
| lineage6.1.3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.3.2.1 | 1 |
| lineage4.9 | 31 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4 | 12 |
| lineage2.2.2 | 1 |
| lineage3 | 6 |
| lineage4.3.3 | 2 |
| La1.8.1 | 3 |
| La1.2 | 2 |
| lineage4.1.1.2 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR266607 | Sensitive | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SRR5818441 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR4822272 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR6046492 | Other | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7131168 | Other | lineage4.1.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | DRR185024 | Other | lineage2.2.2 | None | ERR4821519 | Other | lineage3 | gb | ERR067712 | HR-TB | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283055 | HR-TB | None | ERR3439441 | Other | La1.8.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR3445504 | HR-TB | None | ERR363509 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR4769427 | Other | La1.2 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR5908142 | Sensitive | lineage4.1.1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | SRR10993951 | RR-TB | La1.6 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR1140736 | RR-TB | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR4816571 | Other | lineage1.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | SRR5485478 | Sensitive | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR228105 | Sensitive | lineage3 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819723 | Other | None | SRR5341456 | Other | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None |
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