EBG00000313325 - n.1437_1438delCTinsTCA
Drug resistance types
3 Sensitive
0 RR-TB
2 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.9 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3 | 2 |
| lineage1.1.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 23 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR6197040 | Other | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR7069391 | Other | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4818272 | Other | lineage4.3.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR6046250 | Other | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | ERR4818831 | Other | lineage3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4814905 | Sensitive | lineage4.8 | gb |
|---|
