EBG00000313339 - n.1180A>G
Drug resistance types
9 Sensitive
6 RR-TB
11 HR-TB
3 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 7 |
| lineage4.8 | 4 |
| lineage2.2.1 | 13 |
| lineage2.2.1.1 | 1 |
| lineage4.9 | 23 |
| lineage4.1.2.1 | 10 |
| lineage4.3.3 | 5 |
| lineage4.1.1.3 | 4 |
| lineage4.3.2 | 2 |
| lineage1.1.3.1 | 2 |
| La1.2 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.6.2.2 | 3 |
| lineage6.2.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage6.1.3 | 1 |
| La1.8.1 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| La1.3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage6.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 104 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786076 | Other | lineage3 | None | ERR10796599 | Other | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR1180563 | Sensitive | lineage4.9 | None | ERR2600613 | Sensitive | lineage4.8 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR5153833 | Other | lineage2.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769418 | Other | La1.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR4817055 | Other | lineage4.1.2.1 | None | SRR7070482 | Other | lineage4.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4586795 | Other | La1.8.1 | None | SRR7069391 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR7070469 | Other | lineage4.3.1.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR1183681 | Other | lineage4.9 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR1181270 | Sensitive | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | SRR16278274 | Other | La1.4 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515032 | Other | lineage3 | None | ERR3283008 | Other | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR6046442 | Other | lineage3 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR3077969 | Other | La1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | SRR6046250 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR4800231 | Pre-XDR-TB | lineage2.2.1 | in | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4820193 | Other | lineage3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815615 | Other | lineage3 | gb | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR1238558 | Other | lineage4.9 | None | ERR4816231 | Sensitive | lineage4.1.1.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR4819641 | Other | lineage4.6.2.2 | None |
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