EBG00000313339 - n.1180A>G
Drug resistance types
24 Sensitive
21 RR-TB
31 HR-TB
10 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
156 Other
lineage Counts
| lineage | Count |
|---|---|
| 9 | |
| lineage4.3.4.2.1 | 2 |
| lineage4.9 | 28 |
| lineage1.1.2 | 7 |
| lineage4.5 | 4 |
| lineage4.1 | 1 |
| lineage4.1.2.1 | 26 |
| lineage4.8 | 18 |
| lineage4.6.2.2 | 7 |
| lineage1.2.1.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.3 | 10 |
| lineage4 | 7 |
| lineage3.1.2.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.4.1.1 | 7 |
| lineage2.2.1 | 29 |
| lineage3 | 27 |
| lineage4.2.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3 | 5 |
| lineage6.2.3 | 1 |
| lineage4.1.2 | 4 |
| lineage1.1.1 | 2 |
| lineage1.1.3.1 | 4 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 3 |
| lineage1.1.3 | 2 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4.3.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.7 | 2 |
| lineage1.1.1.1 | 1 |
| La1.3 | 2 |
| lineage2.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| La1.8.1 | 3 |
| La1.2 | 2 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage6 | 1 |
| lineage3.1.3 | 1 |
| La1.4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 256 |
Geographic prevalence
Country level data for this variant is available for 65 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815310 | Other | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4814554 | Other | lineage4.1 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4814623 | Other | lineage4.8 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4814801 | Other | lineage4.8 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814867 | Other | La1.2.BCG | gb | ERR4814905 | Other | lineage4.8 | gb | ERR4814911 | Other | lineage4.3.3 | None | ERR4815550 | Other | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815075 | MDR-TB | lineage3 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816001 | Other | lineage3 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816186 | Sensitive | lineage3 | gb | ERR4816032 | Sensitive | lineage4.9 | None | ERR2027297 | RR-TB | lineage4.8 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | ERR4817043 | Sensitive | lineage4.8.2 | gb | ERR4816303 | Other | lineage4.1.1.3 | gb | ERR4816231 | Other | lineage4 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816417 | Other | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816632 | Sensitive | lineage2.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816746 | Sensitive | lineage4.8 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4817709 | HR-TB | lineage4.6.2.2 | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4817975 | Sensitive | lineage4.1.2.1 | gb | ERR4817948 | Other | lineage3 | gb | ERR4817907 | Other | lineage3 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817919 | Other | lineage4.3.4.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4817941 | Other | lineage4.8 | gb | ERR4818003 | Other | lineage1.2.1.2.1 | gb | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR4819017 | RR-TB | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2512485 | Sensitive | lineage4.3.4.2 | gb | ERR4819031 | Sensitive | lineage4.1.2.1 | None | ERR4818232 | Other | lineage4.1.2 | gb | ERR2512504 | Other | lineage4.1.2.1 | gb | ERR4818831 | Other | lineage3 | None | ERR4818283 | Sensitive | lineage4.5 | gb | ERR4818877 | Other | lineage3 | gb | ERR1199087 | Sensitive | lineage4.6.1.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818351 | Other | lineage1.1.3 | None | ERR245790 | Sensitive | None | ERR4818471 | Other | lineage2.2.1 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4818440 | Other | lineage6.3.1 | None | ERR4818538 | Other | lineage3 | gb | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4820290 | Other | lineage3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819331 | Sensitive | lineage4.3.4.2 | gb | ERR4820729 | Other | lineage2.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819524 | Other | lineage3 | None | ERR4820367 | Sensitive | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514295 | HR-TB | lineage3 | gb | ERR4820404 | Other | lineage4.3.2 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514515 | Other | lineage4.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR2515032 | Other | lineage3 | None | ERR2514689 | Sensitive | lineage1.1.2 | gb | ERR4819824 | Sensitive | lineage4.4.2 | gb | ERR2514756 | Other | lineage3 | gb | ERR4820498 | HR-TB | lineage4.8 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820815 | Other | lineage1.1.3 | gb | ERR4820558 | Other | lineage4.8 | gb | ERR4820829 | Other | lineage4.8 | None | ERR4821812 | Other | lineage4.8 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820193 | Other | lineage3 | None | ERR4820188 | Other | lineage3 | gb | ERR4820833 | HR-TB | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821054 | Other | lineage3 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821154 | Other | lineage2.2.1 | gb | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821149 | Other | lineage3 | gb | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821438 | Other | lineage3 | None | ERR4822051 | Sensitive | lineage4.3.3 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821519 | Other | lineage3 | gb | ERR4821505 | Other | La1.3 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045379 | Other | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6046442 | Other | lineage3 | None | SRR6046646 | Other | lineage4.7 | gb | ERR3077969 | Other | La1.3 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6397642 | RR-TB | None | SRR6398097 | Other | lineage4.2.1.1 | ca | SRR6832644 | Other | lineage4.3.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR8217902 | MDR-TB | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR7851312 | Other | La1.2 | None | ERR10796630 | HR-TB | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769418 | Other | La1.2 | None | ERR4627319 | Other | La1.8.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4797031 | HR-TB | lineage3 | in | ERR4769442 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4800197 | HR-TB | None | ERR4797039 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799823 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800231 | Pre-XDR-TB | lineage2.2.1 | in | ERR5864073 | MDR-TB | lineage2.2.1 | None | ERR4800293 | Pre-XDR-TB | lineage2.2.1 | in | ERR6197024 | RR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6197040 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9117826 | Other | lineage3.1.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972432 | MDR-TB | lineage2.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR11972294 | Sensitive | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR16156775 | Other | lineage4.9 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815169 | Other | lineage4.8 | gb | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303810 | Sensitive | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815257 | HR-TB | lineage4.4.1.1 | None | ERR4815615 | Other | lineage3 | gb | ERR4815278 | Other | lineage4.8 | None |
|---|
