EBG00000313339 - n.2641C>A
Drug resistance types
19 Sensitive
6 RR-TB
6 HR-TB
12 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3.1 | 1 |
| lineage2.2.1 | 9 |
| lineage3 | 9 |
| lineage3.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.5 | 2 |
| lineage4.9 | 16 |
| lineage4.1.2.1 | 7 |
| lineage3.1.2.1 | 2 |
| lineage4 | 8 |
| lineage4.1.1.3 | 2 |
| lineage3.1 | 1 |
| lineage4.7 | 7 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| La1.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| La1.8.1 | 2 |
| lineage4.2.1 | 1 |
| La1.2 | 2 |
| 1 | |
| lineage4.7;lineage4.3.4.2 | 2 |
| lineage4.3.4.2 | 5 |
| lineage3.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage6 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage1.2.1.2 | 1 |
| La1.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513128 | Sensitive | lineage4.1.1.3.1 | gb | ERR4817917 | Other | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR2512520 | Sensitive | lineage3.1.1 | gb | ERR2513259 | Other | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818283 | Sensitive | lineage4.5 | gb | ERR4818536 | Other | lineage4.9 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513348 | Other | lineage3 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819462 | Other | lineage4 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR5153833 | Other | lineage2.2.1 | None | ERR4820083 | Sensitive | lineage3.1 | gb | ERR4820193 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR6046250 | Other | lineage4.9 | None | ERR4821519 | Other | lineage3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4830534 | MDR-TB | lineage2.2.1 | None | ERR4828471 | HR-TB | lineage2.2.1.1 | vn | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046442 | Other | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3077969 | Other | La1.3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6896338 | Sensitive | lineage4.3.2.1 | None | SRR6930920 | Sensitive | lineage4.2.1.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR8600276 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR10370893 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | SRR7851312 | Other | La1.2 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769418 | Other | La1.2 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197025 | Other | lineage4.7 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197023 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197027 | Other | lineage4.7 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197029 | Other | lineage4.7 | None | ERR6197033 | Other | lineage4.7 | None | ERR6197031 | Other | lineage4.7 | None | ERR6197037 | MDR-TB | lineage4.3.4.2 | None | ERR6197035 | Other | lineage4.7 | None | ERR6197036 | Other | lineage4 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6197039 | MDR-TB | lineage4.3.4.2 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9787033 | Sensitive | lineage6 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101454 | Sensitive | lineage4.3.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2101409 | Sensitive | lineage4.3.4.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4814312 | Other | lineage4 | None | SRR21713567 | Sensitive | lineage4.5 | None | ERR4815210 | Other | lineage4.3.4.2 | gb | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4815502 | Other | lineage4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4817010 | HR-TB | lineage1.2.1.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816231 | Other | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816417 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb |
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