EBG00000313325 - n.212C>T
Drug resistance types
5 Sensitive
4 RR-TB
7 HR-TB
7 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2 | 2 |
| lineage4.9 | 13 |
| 5 | |
| lineage1.1.3.3 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.3.3 | 1 |
| lineage3.1.3 | 2 |
| lineage1.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage3 | 2 |
| lineage4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage2.2.1 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799058 | MDR-TB | lineage3.1.2 | in | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4816322 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR3675555 | HR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR2512716 | HR-TB | lineage4.6.2.2 | gb | ERR1035138 | MDR-TB | None | ERR4818545 | Other | lineage4.1.2 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5065330 | Sensitive | lineage1.1.1.1 | vn | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR6045124 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821725 | Other | lineage4.8.2 | gb | ERR502478 | RR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR8217918 | HR-TB | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR1034690 | MDR-TB | lineage3.1.2 | in |
|---|
