EBG00000313339 - n.2056C>T
Drug resistance types
11 Sensitive
15 RR-TB
24 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 12 |
| lineage2.2.1.1 | 2 |
| lineage4.3.3 | 6 |
| La1.8.1 | 3 |
| lineage4.9 | 22 |
| 4 | |
| lineage3 | 16 |
| lineage4.2.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 6 |
| lineage3.1.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 11 |
| lineage1.1.1 | 3 |
| lineage4.2.2.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4 | 10 |
| lineage4.4.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.5 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.8 | 5 |
| lineage4.1.1.3 | 3 |
| lineage6.3.1 | 1 |
| lineage4.3.2 | 3 |
| lineage4.6.2.2 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 135 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10766998 | MDR-TB | lineage2.2.1.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR16156832 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4814776 | Sensitive | lineage3 | None | SRR8692810 | Other | lineage4.9 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815167 | Sensitive | lineage4.9 | None | ERR4815669 | HR-TB | lineage1.2.2.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815488 | HR-TB | lineage4.4.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4817349 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR4816231 | Other | lineage4 | None | ERR4816417 | Other | lineage4.9 | None | ERR4817109 | Other | lineage3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR2229442 | HR-TB | lineage4.8 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR3275190 | Other | lineage3 | nl | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818952 | Other | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4821848 | Other | lineage2.2.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR2446509 | Other | lineage3 | nl | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR4820193 | Other | lineage3 | None | ERR4821054 | Other | lineage3 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046737 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR067712 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796599 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796630 | HR-TB | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3470682 | Other | lineage3 | None | ERR3283051 | Other | lineage4.9 | None | ERR3468548 | Other | La1.8.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR5908130 | Sensitive | lineage4.4.1.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4798823 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR5908133 | Sensitive | lineage4.3.3 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR9119062 | Sensitive | lineage4.4.1.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None |
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