EBG00000313339 - n.2056C>T
Drug resistance types
8 Sensitive
8 RR-TB
11 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 3 |
| lineage1.1.1 | 2 |
| lineage3 | 8 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 21 |
| lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.5 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1 | 12 |
| lineage4.1.2.1 | 5 |
| lineage4.3.3 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1 | 2 |
| La1.8.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR4817434 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR6046250 | Other | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR10796594 | Other | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4818128 | Other | lineage4.1.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR3470682 | Other | lineage3 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR10796634 | Other | lineage4.7 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR3275190 | Other | lineage3 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4821054 | Sensitive | lineage3 | None | SRR1238558 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR7069391 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR1063855 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SRR7240350 | Other | La1.8.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR1173719 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None |
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