EBG00000313325 - n.224G>A
Drug resistance types
41 Sensitive
5 RR-TB
10 HR-TB
0 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 2 |
| La1.8.1 | 2 |
| lineage4.8 | 5 |
| lineage4.1.1.3 | 1 |
| lineage4 | 5 |
| lineage4.2.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.8.1 | 1 |
| La1.3 | 7 |
| 2 | |
| lineage4.9 | 47 |
| lineage4.1.2.1 | 7 |
| lineage2.2.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6832644 | Other | lineage4.3.3 | None | ERR3468488 | RR-TB | La1.8.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR067712 | HR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769514 | Other | La1.3 | None | ERR3797043 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769453 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR6358951 | HR-TB | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR16149188 | XDR-TB | lineage4.2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4815310 | Other | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817738 | Sensitive | lineage4.6.2.2 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822096 | Sensitive | lineage4.8 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None |
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