EBG00000313325 - n.602C>T
Drug resistance types
19 Sensitive
6 RR-TB
7 HR-TB
7 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 6 |
| lineage2.2.1 | 8 |
| lineage4.3.3 | 4 |
| lineage4.9 | 42 |
| lineage3 | 12 |
| lineage4 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.8 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.1.2.1 | 10 |
| lineage4.3.4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1 | 1 |
| 7 | |
| lineage3.1.2.1 | 2 |
| lineage1.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.5 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.6.2.2 | 1 |
| La3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.7 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 133 |
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046860 | Other | lineage4.4.1.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR10796632 | Other | lineage4.3.3 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769419 | Other | lineage4.9 | None | ERR5864426 | MDR-TB | lineage2.2.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769495 | Other | La1.3 | None | SRR12199457 | Sensitive | lineage4.9;lineage1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR16370694 | Sensitive | lineage4.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR19233762 | Sensitive | lineage4.1.1 | None | SRR20969674 | Sensitive | lineage2.2.1.2 | None | SRR20969691 | Sensitive | lineage2.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815502 | Other | lineage4.1 | None | ERR181744 | HR-TB | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4814976 | Other | lineage4.9 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816001 | Other | lineage3 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | SRR5818386 | Other | None | ERR4816417 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4816571 | Other | lineage1.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818272 | Other | lineage4.3.2 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4818232 | Other | lineage4.1.2 | gb | ERR4818261 | Other | lineage1.1.2 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4817584 | MDR-TB | lineage3 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4819171 | Sensitive | lineage1.2.2.2 | gb | ERR4819723 | Other | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819425 | Other | lineage3 | gb | ERR1035138 | MDR-TB | None | ERR2514173 | Other | lineage4.5 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514613 | Other | lineage4.8 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820193 | Other | lineage3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4820833 | HR-TB | None | ERR4820130 | Other | lineage3 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821802 | Other | La3 | gb | ERR4821222 | Other | lineage4.3.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821519 | Other | lineage3 | gb | SRR6045642 | Other | lineage3.1.2.2 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4821725 | Other | lineage4.8.2 | gb | SRR5818391 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818394 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818406 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818442 | Other | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818463 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046442 | Other | lineage3 | None | ERR4828962 | Other | lineage4.1.4 | it | SRR6046463 | Other | lineage4.4.1.1 | None |
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