EBG00000313325 - n.602C>T
Drug resistance types
15 Sensitive
2 RR-TB
6 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 36 |
| lineage4.8 | 2 |
| lineage3 | 5 |
| lineage2.2.1.2 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.4.1.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 5 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage1.1.2 | 1 |
| lineage6.1.3 | 1 |
| La1.2 | 1 |
| lineage4.1.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818391 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4820193 | Other | lineage3 | None | ERR4769493 | Other | lineage4.9 | None | SRR5818463 | Sensitive | lineage4.9 | None | SRR20969691 | Sensitive | lineage2.2.1.2 | None | ERR4818831 | Other | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR7069391 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4816868 | Other | lineage4.4.1.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR5818394 | Other | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR5818399 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818425 | Other | lineage4.9 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SRR5818452 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5818459 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR20969674 | Sensitive | lineage2.2.1.2 | None | ERR212123 | Other | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | ERR4829360 | Sensitive | lineage4.7 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR161037 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR5818448 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR5818398 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5818408 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR7069837 | Sensitive | lineage4.1.1.3 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR6045347 | Other | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None |
|---|
