EBG00000313339 - n.885A>C
Drug resistance types
64 Sensitive
0 RR-TB
14 HR-TB
10 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 4 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.2.1 | 8 |
| 6 | |
| lineage4.9 | 30 |
| lineage4.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage2.2.1 | 17 |
| lineage4.3.4 | 1 |
| lineage4.8 | 7 |
| lineage4.6.1.1 | 1 |
| lineage4 | 2 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage3 | 5 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.5 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 4 |
| lineage3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage5.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3.3 | 4 |
| La1.8.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.2.1 | 2 |
| La1.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| La1.6 | 1 |
| lineage2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21658550 | Other | lineage1.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR176771 | Sensitive | None | ERR176780 | Sensitive | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR4814521 | Sensitive | lineage2.2.1 | gb | ERR161125 | Sensitive | lineage4.3.4 | None | ERR4814905 | Other | lineage4.8 | gb | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR4816231 | Other | lineage4 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR216929 | Sensitive | lineage4.3.4.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR212082 | Sensitive | lineage4.9.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR216949 | Sensitive | lineage4 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR4818272 | Other | lineage4.3.2 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4817554 | Other | lineage1.1.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4819206 | Other | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4820083 | Sensitive | lineage3.1 | gb | ERR2514692 | Other | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820193 | Other | lineage3 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821229 | Other | lineage2.2.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821519 | Other | lineage3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6046737 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR502494 | Other | lineage5.1.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR323036 | HR-TB | None | SRR8600288 | Other | La1.8.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR4235026 | Other | lineage4.9 | None | ERR4235027 | Other | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR5866478 | MDR-TB | lineage4.2.1 | None | ERR6197040 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR718384 | MDR-TB | lineage4.5 | th | ERR718268 | Sensitive | lineage1.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR751729 | Other | lineage1.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR987719 | HR-TB | lineage3 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR10993953 | Other | La1.6 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR124452 | HR-TB | lineage2 | None | SRR16278292 | Other | La1.4 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None |
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