EBG00000313339 - n.2103C>T


Drug resistance types
8 Sensitive 8 RR-TB 19 HR-TB 24 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
lineage3.1.2.2 1
lineage4.9 42
lineage4.9;lineage9 2
lineage6.1.3 1
lineage4.8 4
La2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 1
La1.7 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage3 4
lineage1.2.2.1;lineage4.4.1.1 1
lineage6.1.1 2
lineage4.6.1.2 1
lineage4.1.1.3 3
lineage4.1.2.1 4
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4.2 2
lineage4.3.2 2
lineage2.2.1 9
lineage4.3.2;lineage4.9 1
La1.7;lineage4.9 2
lineage4 2
lineage4.2.1 1
lineage1.1.3.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.2.BCG 2
lineage2.2.1.1 1
lineage4.8.1 1
lineage3.1.1 2
La1.8.1 1
La2;lineage4.9;lineage9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.3.4.1 1
lineage4.4.2 1
1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage4.3 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 111
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6045496 Other lineage6.1.3 None
ERR4819877 HR-TB lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR19295647 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR19303899 Other lineage3 None
ERR926161 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR22424765 HR-TB lineage4.8 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR9787014 RR-TB lineage6.1.1 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR4769554 RR-TB lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR7131229 Other lineage4.1.2.1 None
ERR926165 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR10796555 Other lineage4.1.2.1 None
ERR10796592 Other lineage4.9 None
ERR10796591 Other lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR926163 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR5979407 Other lineage3 None
ERR4816478 HR-TB lineage4 None
ERR4818272 Other lineage4.3.2 None
SRR19303815 Other lineage4.8 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR970441 RR-TB lineage2.2.1.1 None
ERR4188247 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6045909 Other lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR3283030 HR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR3797019 Other La1.8.1 None
SRR6046250 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR19304104 Other lineage4.8 None
SRR3675245 Other lineage4.1.2.1 None
SRR7131061 Other lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR926159 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1183111 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR2600422 MDR-TB lineage2.2.1 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR926164 Other lineage4.9 None
ERR4811101 Other lineage4.4.2 None
ERR4816656 Other lineage4.9 None
SRR1172146 Sensitive lineage4.9 None
ERR10796589 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR970413 MDR-TB lineage2.2.1 None
SRR6045928 Other lineage4.9 None
SRR6045384 Other lineage4.1.2.1 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796566 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
ERR971389 Other lineage4.9 None
SRR11349207 RR-TB lineage2.2.1 None
ERR3797080 Sensitive lineage4.9 None
ERR987722 MDR-TB None
SRR6045795 Other lineage2.2.1 None
ERR3797029 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675492 Other La1.7;lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR9907760 Pre-XDR-TB lineage4.3 None
ERR926162 Sensitive lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
SRR1172310 MDR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR926158 Sensitive lineage4.9 None