EBG00000313339 - n.2103C>T


Drug resistance types
5 Sensitive 10 RR-TB 31 HR-TB 21 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 76 Other
lineage Counts
lineage Count
lineage3 10
lineage4.2.1 1
lineage2.2.1 12
lineage4.9 16
lineage4.3.4.2 5
lineage4.8 11
lineage4.4.1.1 1
lineage1.1.2 2
lineage4 5
lineage2.2.1.1 2
lineage4.1.1 2
21
lineage4.1.2.1 8
lineage4.6.1.2 1
lineage4.3.2.1 1
lineage4.2.1.1 1
lineage4.1.2 2
lineage4.3.2 3
lineage3.1.2.1 1
lineage4;lineage3 1
lineage4.4.1.2 1
lineage4.3.3 5
lineage1.2.1.2.1 1
lineage4.6.2.2 2
lineage4.1.1.3 4
lineage6.1.3 1
lineage4.1.1.2 1
lineage1.1.3.1 1
lineage4.2.2.2 2
lineage4.5 1
lineage4.4 1
lineage4.7 1
lineage3.1.2.2 1
lineage4.3.4.1 2
lineage4.9;lineage4.3.4 1
lineage4.3 2
lineage4.3.4.2.1 1
La1.8.1 7
lineage4.6.1.2;lineage4.3.3 1
La1 1
lineage6.1.1 2
La1.2 1
lineage3.1.1 2
lineage4.4.2 1
lineage3.1.2 1
lineage4.6 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 153
Geographic prevalence
Country level data for this variant is available for 24 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18913779 Other lineage3 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR17832802 HR-TB lineage3 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR19295647 Sensitive lineage4.9 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303815 Other lineage4.8 None
SRR19303917 Other lineage2.2.1 None
SRR19304109 Other lineage4.8 None
SRR19304083 Other lineage4.4.1.1 None
SRR19304104 Other lineage4.8 None
ERR4815680 Other lineage1.1.2 gb
SRR22424765 MDR-TB lineage4 None
ERR4815204 Other lineage2.2.1.1 gb
SRR3675474 Other lineage4.1.1 None
SRR3675488 HR-TB None
SRR3675265 Other lineage4 None
SRR3675222 Other None
SRR3675245 Other lineage4.1.2.1 None
ERR4816300 Other lineage4.1.2.1 None
ERR176740 HR-TB None
SRR3675282 Other None
SRR3675312 HR-TB lineage4 None
ERR4815065 Other lineage4.1.2.1 gb
ERR4817131 Pre-XDR-TB None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR2513392 Other lineage4.3.2.1 gb
ERR4817730 Other lineage4.2.1.1 gb
ERR4816656 HR-TB None
ERR4818065 Other lineage4.1.2.1 None
ERR2513401 HR-TB lineage3 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4818853 Other lineage4.1.2 gb
ERR4818272 Other lineage4.3.2 None
ERR4818498 Other lineage3.1.2.1 gb
ERR4818929 HR-TB None
SRR5007163 MDR-TB lineage4;lineage3 None
ERR4820275 HR-TB lineage4.4.1.2 gb
ERR4819093 Other lineage4.3.3 None
ERR2513619 Other lineage4.8 gb
ERR4819206 Other lineage4.8 None
ERR4819630 Other lineage4.8 gb
ERR2514394 Other lineage4.3.4.2 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820846 RR-TB lineage4.6.2.2 gb
ERR4819980 Other lineage4.1.2.1 None
ERR4820026 Other lineage3 None
ERR4819950 RR-TB lineage4.1.1.3 gb
ERR4821127 HR-TB lineage4.6.2.2 gb
SRR5341470 HR-TB None
SRR6045496 Other lineage6.1.3 None
ERR4821811 RR-TB lineage4.9 None
ERR4822033 Other lineage3 None
SRR6045519 HR-TB None
SRR6045553 RR-TB lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR4822169 Other lineage4.1.1.3 gb
ERR4822176 Other lineage4.1.1.2 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821718 Other lineage4.2.2.2 gb
ERR4821607 Sensitive lineage4.5 gb
SRR5818388 Other lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045952 HR-TB None
SRR5818690 Other lineage4.2.2.2 None
SRR6044769 Other lineage1.1.2 None
SRR6044787 Other lineage4.4 None
SRR6044835 Sensitive lineage4 None
SRR6045909 Other lineage4.8 None
SRR6045928 Other lineage4.9 None
SRR6045295 Other lineage4.7 None
ERR4829010 MDR-TB lineage2.2.1 it
SRR6045384 Other lineage4.1.2 None
SRR6046250 Other lineage4.9 None
SRR6046701 Other lineage3.1.2.2 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6046729 Other None
ERR4972567 MDR-TB lineage4.3.2 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131061 Other lineage2.2.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131109 Pre-XDR-TB lineage4.8 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131198 Other lineage4.3.3 None
SRR7131161 Other lineage4.8 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR323039 HR-TB None
SRR7131233 MDR-TB lineage4.3.3 None
ERR1034652 Other None
ERR323053 HR-TB None
ERR10219876 Other lineage4.3.4.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796555 Other lineage4.1.2.1 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR10796590 Other lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796589 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR1213919 MDR-TB lineage4.3 None
ERR10796592 Other lineage4 None
ERR1213875 Other lineage4.3.3 de
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR3439489 RR-TB La1.8.1 None
ERR1213930 Other lineage4.3.2 pe
ERR1213931 MDR-TB lineage4.6.1.2;lineage4.3.3 pe
ERR1213928 MDR-TB lineage4.3.3 pe
ERR3283010 Other La1 None
ERR3283030 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3797022 Other La1.8.1 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797060 Other La1.8.1 None
ERR4188253 Other La1.8.1 None
ERR4188124 Other La1.8.1 None
ERR3797073 HR-TB La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR4772225 Other La1.2 None
ERR4188247 HR-TB None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769554 RR-TB lineage4.9 None
ERR4798504 Other lineage3 None
ERR736865 HR-TB None
ERR4811101 Other lineage4.4.2 None
ERR5979407 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR6197042 RR-TB lineage4.9 None
ERR970441 RR-TB lineage2.2.1.1 None
ERR9117704 Other lineage4.6 None
ERR9117729 Other lineage3 None
ERR9117794 Sensitive lineage3 None
ERR970413 MDR-TB lineage2.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR987722 HR-TB None
SRR11349207 RR-TB lineage2.2.1 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
ERR9907760 Pre-XDR-TB lineage4.3 None
SRR10315640 MDR-TB lineage4.8 None
SRR1172214 HR-TB lineage4.9 None
SRR1172146 Sensitive lineage4.9 None
SRR1174897 HR-TB None
SRR1172310 HR-TB None
SRR11972417 MDR-TB lineage2.2.1 None