EBG00000313339 - n.2103C>T
Drug resistance types
17 Sensitive
5 RR-TB
24 HR-TB
18 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 43 |
| lineage6.1.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 10 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.2.BCG | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage3 | 4 |
| lineage4.4.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.8 | 4 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4 | 2 |
| lineage4.3 | 1 |
| lineage4.3.2 | 2 |
| lineage4.9;lineage9 | 2 |
| La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage6.1.1 | 2 |
| 1 | |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2.1 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage3.1.1 | 2 |
| La1.7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR926161 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1915485 | Other | La1.2.BCG | None | ERR176740 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR17832802 | HR-TB | lineage3 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR3675265 | Other | lineage4 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3797019 | Other | La1.8.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR926163 | Other | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR6045928 | Other | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR987722 | MDR-TB | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR10796589 | Other | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR19304104 | Other | lineage4.8 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR926164 | Other | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR6044835 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796566 | Other | lineage4.9 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR19303899 | Other | lineage3 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR10796555 | Other | lineage4.1.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR3797029 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
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