EBG00000313325 - n.1249T>A


Drug resistance types
171 Sensitive 7 RR-TB 9 HR-TB 23 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 78 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 14
lineage4.1.2 9
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1;lineage4.9 2
lineage4.9 60
lineage4.4.1.2 1
lineage4.1.2.1 9
lineage4.4.1.1 10
lineage2.2.1 38
M.canetti;lineage2.1;lineage4.9 1
lineage4.3.3 12
lineage4.2.1 2
lineage4.8 7
lineage3 9
La1.2 1
La1.8.1 21
lineage4.7 2
lineage4.1.1.1 3
lineage4.3.4.2 3
lineage1.1.3.1 2
lineage1.1.3.2 4
La1.8.X-unk6 1
lineage4 4
lineage6.1.1 3
1
lineage4.1.1.3 5
lineage2.2.1.1 2
La1.7.1 4
lineage4.3.2.1 11
lineage4.6.2.2 3
lineage4.6.1.1 3
lineage1.1.2 2
lineage4.3.4.1 4
lineage3.1.1 7
lineage1.2.2.2 1
La1.2.BCG 5
lineage4.1.2.1.1 1
lineage1.2.1.2 1
lineage4.6.1.2 1
lineage4.1.1.3;lineage4.9 1
lineage1.2.1.2.1 1
lineage4.5 3
lineage3.1.2.2 1
lineage1.1.1 1
lineage1 1
lineage4.1.1.2 2
lineage4.1 1
lineage4.3.2.1;lineage4.9 1
lineage1.2.2.2;lineage4.3.4.2.1 1
lineage4.4.1.1.1 1
lineage5 1
lineage4.9;lineage5.1.1 1
lineage5.1.1 2
La1.4 2
La1.6 3
lineage2.2.2 1
lineage4.9.1 1
La1.3 2
lineage1.1.2;lineage4 1
spoligotype Counts
spoligotype Count
None 298
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6982070 Sensitive lineage2.2.1;lineage4.9 None
SRR7443723 Sensitive lineage4.9 None
ERR736822 Sensitive lineage4.4.1.2 None
SRR3675245 Other lineage4.1.2.1 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6982430 Sensitive lineage4.3.4.2.1 None
SRR1062820 Pre-XDR-TB lineage2.2.1 None
ERR4769507 Sensitive lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21714045 Other lineage2.2.1 None
SRR6982514 Sensitive lineage4.3.3 None
ERR2179737 HR-TB lineage4.2.1 None
ERR181749 Sensitive lineage4.3.4.2.1 None
ERR2515460 Other lineage4.8 za
SRR17856664 Sensitive lineage3 None
SRR1181085 Sensitive lineage4.1.2 None
SRR2101803 Sensitive lineage4.3.3 None
SRR6896255 Sensitive lineage4.3.3 None
SRR13199734 Other La1.2 None
SRR7240506 Other La1.8.1 None
SRR6982414 Sensitive lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR502484 Sensitive lineage4.9 None
SRR6982337 Sensitive lineage4.7 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR10129602 Sensitive lineage4.3.4.2 None
ERR9786663 Other lineage4.3.4.2 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR502498 Sensitive lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
SRR6982056 Other lineage4.3.4.2.1 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR7443738 Sensitive lineage4.9 None
SRR7504773 Sensitive lineage4.9 None
ERR216950 Sensitive lineage1.1.3.2 None
SRR7240420 Other La1.8.X-unk6 None
SRR1792265 Other La1.8.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR7443769 Sensitive lineage4 None
ERR5162133 Sensitive La1.8.1 None
ERR9787099 Sensitive lineage6.1.1 None
SRR6982196 Sensitive None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR1169301 Pre-XDR-TB lineage4.1.1.3 None
SRR6824516 Sensitive lineage2.2.1.1 None
SRR6982178 Sensitive lineage2.2.1 None
SRR1792247 Other La1.7.1 None
SRR18391683 Other La1.7.1 None
SRR6982105 Sensitive lineage2.2.1.1 None
ERR473304 Sensitive lineage2.2.1 None
SRR6982077 Sensitive lineage4.3.2.1 None
ERR473298 Sensitive lineage4.6.2.2 None
SRR6981993 Sensitive lineage4.3.2.1 None
SRR1173717 MDR-TB lineage4.6.1.1 None
ERR9786447 Sensitive lineage4.1.2.1 None
ERR502490 Sensitive lineage4.9 None
SRR6982057 HR-TB lineage4.3.3 None
ERR2660499 Sensitive lineage4.1.1.3 None
SRR21240055 Other lineage4.1.2.1 None
SRR7443725 Sensitive lineage4.9 None
SRR6856094 Other lineage2.2.1 None
SRR12882699 Sensitive lineage1.1.2 None
SRR7444072 Sensitive lineage4.9 None
SRR7443785 Sensitive lineage4.9 None
SRR7069391 Other lineage4.9 None
ERR216930 Sensitive lineage4.3.4.1 None
SRR7443767 Sensitive lineage4.9 None
SRR5341288 Pre-XDR-TB lineage3 None
SRR6045205 Sensitive lineage4.9 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
SRR2101685 Sensitive lineage4.9 None
SRR7240148 Other La1.8.1 None
ERR8025347 Sensitive lineage4.9 None
SRR4034393 MDR-TB lineage4.1.2.1 None
ERR108424 Sensitive lineage4.8 None
ERR5311080 Other La1.8.1 None
ERR176450 Sensitive lineage4.1.1.3 None
ERR245764 HR-TB lineage3.1.1 None
ERR987719 HR-TB lineage3 None
SRR7645800 MDR-TB lineage2.2.1 None
ERR212042 HR-TB lineage3.1.1 None
ERR2515148 Sensitive lineage4.3.3 None
ERR176771 Sensitive lineage4.3.4.2.1 None
SRR6982048 Sensitive lineage4.3.2.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR7443750 Sensitive lineage4.9 None
SRR6982227 Sensitive lineage4.9 None
SRR7443724 Sensitive lineage4.9 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6982229 Sensitive lineage2.2.1 None
SRR3105736 Sensitive lineage1.2.2.2 None
SRR6046250 Other lineage4.9 None
SRR5341460 Other lineage3 None
SRR1169203 Pre-XDR-TB lineage4.1.1.3 None
SRR6789621 Other lineage4.9 None
ERR181905 Sensitive lineage2.2.1 mw
SRR7086711 Other La1.2.BCG None
SRR18003031 HR-TB lineage2.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR323068 Sensitive lineage4.9 None
SRR6981981 Sensitive lineage4.3.3 None
ERR10762317 Pre-XDR-TB lineage4.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR6982139 Sensitive lineage4.9 None
SRR1011450 Pre-XDR-TB lineage2.2.1 None
SRR22175227 HR-TB lineage3 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR12420628 MDR-TB lineage2.2.1 None
SRR6855963 Sensitive lineage2.2.1 None
SRR6397389 Sensitive lineage4.1.2.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
ERR163970 Sensitive lineage4.6.1.2 None
SRR7443726 Sensitive lineage4.9 None
ERR3804154 Sensitive lineage4.1.2.1 None
SRR1172808 Other lineage4.9 None
SRR6982328 Other lineage3.1.1 None
SRR21764246 Other lineage4.9 None
SRR2101663 Sensitive lineage1.1.3.2 None
ERR4820193 Other lineage3 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR7443747 Sensitive lineage4.9 None
SRR1915484 Other La1.2.BCG None
SRR7240350 Other La1.8.1 None
SRR6982484 Other lineage3.1.1 None
SRR21737226 Sensitive lineage4.5 None
SRR1181242 Sensitive lineage4.1.2 None
SRR6981975 Sensitive lineage4.7 None
ERR072033 Sensitive lineage3.1.2.2 None
SRR2101636 Other lineage4.3.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR7443737 Sensitive lineage4.9 None
ERR2515854 Sensitive lineage2.2.1 None
SRR6982198 HR-TB lineage1 None
SRR6982088 Other lineage4.1.1.2 None
SRR6982362 Sensitive lineage4.3.2.1 None
SRR2101595 RR-TB lineage4.3.4.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR6982011 Sensitive lineage4.1.1.1 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR2101691 Other lineage2.2.1 None
ERR502485 Sensitive lineage4.9 None
SRR7240147 Other La1.8.1 None
SRR6397441 Other lineage4.5 None
SRR2101661 Sensitive lineage4.1 None
SRR7240537 Other La1.8.1 None
ERR502497 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR2101681 Sensitive lineage4.8 None
SRR12199468 Sensitive lineage4.9 None
SRR11972378 MDR-TB lineage1.1.2 None
SRR1011488 Sensitive lineage2.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
ERR502486 Sensitive lineage4.9 None
SRR7443730 Sensitive lineage4.9 None
ERR164021 MDR-TB lineage1.2.2.2;lineage4.3.4.2.1 mw
SRR1182994 Sensitive lineage4.1.2 None
SRR1915487 Other La1.2.BCG None
SRR6982106 Sensitive lineage4.8 None
ERR163988 Sensitive lineage4.1.2 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR7443731 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR7443768 Sensitive lineage4.9 None
SRR7444098 Sensitive lineage4.9 None
SRR7236240 Other La1.8.1 None
ERR5865343 MDR-TB lineage2.2.1 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
SRR6982405 Sensitive lineage4.4.1.1 None
ERR439982 Sensitive lineage5 None
SRR7240324 Other La1.8.1 None
SRR6982075 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
SRR6982213 Sensitive lineage4.3.2.1 None
ERR502492 Sensitive lineage4.9 None
SRR21728339 Other lineage3 None
ERR4188010 Other La1.8.1 None
ERR2652981 Sensitive lineage4.1.2.1 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
SRR1792232 Other La1.7.1 None
ERR3799543 Sensitive lineage6.1.1 None
ERR1082134 Sensitive lineage5.1.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
ERR4769518 Sensitive lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR6982092 Other lineage4.3.2.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR7444074 Sensitive lineage4.9 None
SRR7443757 Sensitive lineage4.9 None
SRR7236178 Other La1.8.1 None
SAMN02567676 MDR-TB lineage4.6.1.1 None
ERR4769419 Sensitive lineage4.9 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6981968 Sensitive lineage4.1.2 None
ERR176820 Sensitive lineage4.3.4.2.1 mw
ERR1023250 Sensitive lineage6.1.1 None
ERR779662 Sensitive lineage3.1.1 None
ERR2515721 Sensitive lineage4.3.2.1 None
ERR4822138 Other lineage4.1.2.1 None
SRR2101827 Other lineage4.3.4.2.1 None
SRR1180252 Other lineage4.9 None
SRR14782537 Pre-XDR-TB lineage2.2.1 None
SRR1184383 Other lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR18391772 Other La1.7.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR502472 Sensitive lineage4.6.2.2 None
ERR176780 Sensitive lineage4.9 None
SRR16278292 Other La1.4 None
ERR161125 Sensitive lineage4 None
SRR7236233 Other La1.8.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR6855718 Other lineage4.8 None
ERR9786558 Other lineage4.3.4.2 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR6982190 Sensitive lineage4.3.3 None
SRR21675637 Sensitive lineage4.3.3 None
SRR7443751 Sensitive lineage4.9 None
SRR6982334 Sensitive lineage4.4.1.1 None
ERR2179816 Sensitive lineage4 None
ERR9786258 Sensitive lineage4.3.4.1 None
SRR7443722 Sensitive lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1.1 None
SRR11972188 MDR-TB lineage2.2.1 None
ERR4188253 Other La1.8.1 None
ERR216949 Sensitive lineage4.3.4.1 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6855915 Sensitive lineage4.9 None
ERR5087606 Other La1.8.1 None
SRR10993957 Other La1.6 None
ERR4769537 Sensitive lineage4.9 None
SRR6982494 Other lineage2.2.2 None
SRR16278273 Other La1.4 None
SRR6982175 Sensitive lineage1.1.3.2 None
SRR11972283 MDR-TB lineage2.2.1 None
ERR1063847 Sensitive lineage3.1.1 None
ERR1163055 MDR-TB lineage4.8 None
SRR7645834 Other lineage2.2.1 None
ERR212082 Sensitive lineage4.9.1 None
SRR6824550 Sensitive lineage4.5 None
ERR4769462 Other La1.3 None
ERR4818831 Other lineage3 None
SRR21240029 Sensitive lineage4.3.3 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR6982058 HR-TB lineage2.2.1 None
ERR1203071 Sensitive lineage4.8 None
DRR184913 Sensitive lineage2.2.1 None
SRR7443756 Sensitive lineage4.9 None
SRR7504779 Sensitive lineage4.9 None
SRR7240448 Other La1.8.1 None
ERR779661 Sensitive lineage4.3.4.2.1 None
ERR323048 Sensitive lineage4.9 None
SRR6981939 Other lineage4.3.4.2.1 None
SRR10993953 Other La1.6 None
ERR5162118 Other La1.8.1 None
SRR2101617 Sensitive lineage4.1.1.1 None
ERR4817102 Sensitive lineage1.1.2;lineage4 None
SAMN02350409 Pre-XDR-TB lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR14801294 MDR-TB lineage2.2.1 None
SRR7504776 Sensitive lineage4.9 None
SRR6982050 Other lineage4.3.4.1 None
ERR502483 Sensitive lineage4.9 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982102 Sensitive lineage2.2.1 None
ERR502493 Sensitive lineage4.9 None
ERR4819175 Other lineage4.1.1.3 gb
SRR6982385 Sensitive lineage4.1.2 None
SRR10993951 RR-TB La1.6 None
SRR7069473 Other lineage4.1.1.2 None
ERR4821172 RR-TB lineage4.9 None
SRR7236369 Other La1.8.1 None
SRR1915486 Other La1.2.BCG None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR6982195 Sensitive lineage4.4.1.1 None
ERR161201 Sensitive lineage1.1.3.2 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR7240398 Other La1.8.1 None
ERR2179857 Sensitive lineage4 None
ERR181940 Sensitive lineage3.1.1 None
SRR5341430 Other lineage3 None
SRR11972390 MDR-TB lineage2.2.1 None
ERR4188255 Sensitive lineage4.9 None
ERR4627379 Other La1.8.1 None
SRR6982471 Sensitive lineage2.2.1 None
ERR4627392 Other La1.8.1 None
SRR1181161 Other lineage4.9 None
ERR702399 Sensitive lineage5.1.1 gh
ERR4769479 Other La1.3 None