EBG00000313339 - n.2650A>T
Drug resistance types
8 Sensitive
30 RR-TB
4 HR-TB
10 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 10 |
| lineage2.2.1 | 18 |
| lineage4.8 | 44 |
| lineage4.3.4.2;lineage4.7 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.3 | 5 |
| lineage4.1.2.1 | 9 |
| lineage3.1.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage3 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.2.2 | 1 |
| lineage4.7 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.2 | 1 |
| La1.4 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| La1.8.1 | 1 |
| La1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796598 | Other | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR6197023 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR7070320 | Other | lineage4.8 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR978747 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR7069800 | Other | lineage3.1.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | ERR978751 | Other | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR7070153 | Sensitive | lineage4.1.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR5818388 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4816702 | Other | lineage4.6.2.2 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR6865446 | Other | lineage4.4.1.1 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR7069391 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR176741 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | DRR188816 | Other | lineage4.2.2 | None | ERR978735 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR6197025 | Sensitive | lineage4.7 | None | ERR978748 | Other | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR978752 | Other | lineage4.8 | None | ERR6197029 | Other | lineage4.7 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR7851312 | Other | La1.2 | None | SRR16278274 | Other | La1.4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR7069473 | Other | lineage4.1.1.2 | None | ERR978694 | Other | lineage4.8 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | ERR978756 | Other | lineage4.8 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | ERR4769479 | Other | La1.3 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | SRR6930920 | Sensitive | lineage4.2.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR6197021 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | ERR4816417 | Other | lineage4.9 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR6197035 | Sensitive | lineage4.7 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4818831 | Other | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR21658550 | Other | lineage1.1.1 | None |
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