Rv0668 - c.1066_1068delAGGinsCGC
Drug resistance types
18 Sensitive
73 RR-TB
3 HR-TB
17 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 2 |
| lineage3 | 6 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 3 |
| lineage4.9 | 101 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage2.2.1 | 8 |
| lineage4.3.2.1 | 1 |
| La1.6 | 1 |
| La1.4 | 1 |
| lineage4 | 4 |
| 2 | |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311077 | RR-TB | La1.8.1 | None | ERR1023494 | Sensitive | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR5311087 | Other | La1.8.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861638 | Sensitive | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861650 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage4 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | ERR4815310 | Other | None | ERR1750907 | RR-TB | None | ERR1750944 | Other | lineage4.1.2 | za | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR2229197 | Sensitive | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | ERR4821276 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820586 | Other | lineage3 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None |
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