EBG00000313325 - n.660G>A
Drug resistance types
15 Sensitive
21 RR-TB
15 HR-TB
9 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
188 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 11 |
| lineage4.8 | 8 |
| lineage4.9 | 168 |
| lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4 | 2 |
| lineage1 | 1 |
| lineage4.5 | 3 |
| lineage1.2.2.2 | 1 |
| lineage3 | 2 |
| lineage4.6.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.1 | 2 |
| lineage2.2.1 | 10 |
| lineage4.7 | 2 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.9;La1.8.1 | 1 |
| La1.8.1 | 7 |
| lineage4.2.1 | 1 |
| 1 | |
| La1.8 | 1 |
| La1 | 1 |
| La1.3 | 1 |
| La1.2 | 2 |
| La1.8.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 256 |
Geographic prevalence
Country level data for this variant is available for 19 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR2229781 | Other | lineage4.9 | None | ERR4817274 | Other | lineage4.9 | gb | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2228859 | RR-TB | lineage4 | None | ERR4818988 | Other | lineage1 | None | ERR2228888 | Other | lineage4.8 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818634 | Other | lineage4.6.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR2514613 | Other | lineage4.8 | gb | ERR2514576 | Other | lineage4.8 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR2515191 | Other | lineage2.2.1 | za | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821519 | Other | lineage3 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821564 | Sensitive | lineage4.2.2.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821725 | Other | lineage4.8.2 | gb | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045255 | Sensitive | lineage4.1.2 | gb | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6045267 | RR-TB | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR4829360 | Sensitive | lineage4.7 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR3797024 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283009 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR4586795 | Other | La1.8.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4187819 | Other | La1.8 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4769429 | Other | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769428 | Other | La1.3 | None | ERR4769478 | Other | La1.2 | None | ERR4769505 | Other | lineage4.9 | None | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866171 | Sensitive | lineage4.3.3 | None | ERR5917707 | Sensitive | lineage2.2.1 | by | ERR6201843 | Other | La1.2 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6149874 | Other | La1.8.2 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR13861144 | Other | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR13861141 | HR-TB | lineage4.9 | None | SRR13861143 | Other | lineage4.9 | None | SRR13861147 | Other | lineage4.9 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR13861142 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861150 | Other | lineage4.9 | None | SRR13861161 | Other | lineage4.9 | None | SRR13861157 | Other | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861174 | Other | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861240 | HR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861243 | HR-TB | lineage4.9 | None | SRR13861263 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861254 | Other | lineage4.9 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861280 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR13861293 | Other | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None | SRR13861309 | HR-TB | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861318 | Other | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861348 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861384 | HR-TB | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861390 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861418 | HR-TB | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861480 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861493 | HR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861507 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861515 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861567 | Other | lineage4.9 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861587 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861634 | HR-TB | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13861648 | Other | lineage4.9 | None | SRR13861651 | Other | lineage4.9 | None | SRR13861654 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | SRR13861692 | Other | lineage4.9 | None | SRR13861693 | Other | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861328 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861361 | Other | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861411 | HR-TB | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861694 | Other | lineage4.9 | None | SRR13861697 | Other | lineage4.9 | None | SRR13861706 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861727 | Other | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR16370694 | Sensitive | lineage4.1.1 | None | SRR13861735 | MDR-TB | lineage4.9 | None | ERR4815278 | Other | lineage4.8 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18213684 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR19233762 | Sensitive | lineage4.1.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None |
|---|
