lineage | Count |
---|---|
lineage2.2.1 | 24 |
lineage4.1.1.2 | 2 |
lineage4.1.1.3 | 2 |
lineage4.6.2.2 | 1 |
lineage4.4.1.1 | 8 |
lineage2.2.1;lineage4 | 1 |
La1.8.1 | 11 |
lineage4.3.2.1 | 9 |
La1.2 | 2 |
lineage4.8 | 8 |
lineage4.1.2 | 5 |
lineage4.3.4.1 | 2 |
lineage4.9 | 9 |
lineage4.1.1.1 | 4 |
lineage4.6.4 | 1 |
lineage4.4.1.1.1 | 2 |
lineage4.3.4.2.1 | 5 |
lineage4.1.2.1 | 3 |
lineage1.2.2.1 | 1 |
lineage4.3.3 | 7 |
lineage2.2.2 | 2 |
lineage4.3.2.1;lineage4.9 | 1 |
lineage1.1.3.2 | 3 |
lineage2.2.1.1 | 2 |
lineage3 | 2 |
La1.7.1 | 5 |
lineage4.1.4 | 1 |
lineage3.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.7 | 2 |
lineage1.1.3.1 | 1 |
lineage4.3.4.2 | 2 |
lineage4.1.1.3;lineage4.9 | 1 |
La1.8.1;lineage4.9 | 1 |
lineage1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 133 |
ID | Drug resistance | Lineage | Country iso2 | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR21728710 | Other | lineage4.1.1.3 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR7240448 | Other | La1.8.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR6982194 | Other | lineage2.2.1 | None | ERR6337385 | Other | La1.2 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | ERR2515484 | Sensitive | lineage4.8 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982075 | Sensitive | lineage4.9 | None | SRR7240147 | Other | La1.8.1 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR7236178 | Other | La1.8.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR6982371 | Sensitive | lineage4.1.1.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR7240449 | Other | La1.8.1 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR2101636 | Other | lineage4.3.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SRR7240324 | Other | La1.8.1 | None | ERR867569 | Other | lineage4.9 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR7240068 | Other | La1.8.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2515460 | Other | lineage4.8 | za | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR6982494 | Other | lineage2.2.2 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR6982140 | Other | lineage2.2.1.1 | None | SRR18911138 | Other | lineage3 | None | SRR1791909 | Other | La1.7.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR13199746 | Other | La1.7.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | ERR2515191 | Other | lineage2.2.1 | za | SRR6855917 | Sensitive | lineage4.8 | None | SRR13199734 | Other | La1.2 | None | SRR7236240 | Other | La1.8.1 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2515364 | Sensitive | lineage4.1.2 | za | SRR21728339 | Other | lineage3 | None | SRR18391683 | Other | La1.7.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR7236374 | Other | La1.8.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR18391772 | Other | La1.7.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR2515662 | Other | lineage2.2.1 | za | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982419 | Other | lineage4.8 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | ERR9786844 | Other | lineage4.3.4.2 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR7240070 | Other | La1.8.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SRR1792140 | Other | La1.8.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR867574 | Other | lineage4.9 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR6046250 | Other | lineage4.9 | None |
---|