EBG00000313325 - n.729T>A


Drug resistance types
20 Sensitive 2 RR-TB 51 HR-TB 20 MDR-TB 37 Pre-XDR-TB 0 XDR-TB 74 Other
lineage Counts
lineage Count
lineage2.2.1 35
La1.7 1
lineage4.1.1 2
lineage4.1.2.1 16
La1.7.1 2
lineage4.1.1.3.1 1
lineage4.8 12
lineage1.2.1.2 1
lineage4.3.3 7
lineage4.3.4.2.1 3
lineage2.2.2 16
13
lineage3 10
lineage4 4
lineage4.9 14
lineage3.1.1 2
lineage1.1.2 1
lineage3.1.2.1 2
lineage4.1.1.3 5
lineage4.8.2 2
lineage2.2.2;lineage2.2.1 2
lineage4.6.2.2 1
lineage4.3.2 1
lineage4.6 4
lineage4.1.2 1
lineage4.5 2
lineage4.8.1 1
lineage2.2.1.1 3
La3 1
La1.8.1 4
lineage1.1.3.1 2
lineage4.2.2.2 1
lineage3.1.2.2 1
lineage4.4.1.1 4
lineage4.7 1
lineage4.3.4.1 1
lineage4.2.1 1
lineage4.7;lineage4.3.4.2 1
lineage1.1.3.2 1
lineage2.2 20
lineage4.3 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 204
Geographic prevalence
Country level data for this variant is available for 26 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR17111238 Other La1.7 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR16370694 Sensitive lineage4.1.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18053779 Other La1.7.1 None
SRR18213684 Pre-XDR-TB lineage4.1.1.3.1 None
SRR18213721 Other lineage4.8 None
SRR18391760 Other La1.7.1 None
SRR19233762 Sensitive lineage4.1.1 None
SRR20969475 Other lineage1.2.1.2 None
ERR4815268 Other lineage4.8 None
SRR22048536 Other lineage4.3.3 None
ERR181733 Sensitive lineage4.3.4.2.1 None
SRR3105797 Pre-XDR-TB lineage2.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR3675245 Other lineage4.1.2.1 None
ERR176672 Sensitive lineage4.3.4.2.1 None
ERR192070 Other None
ERR4816001 Other lineage3 None
ERR4816186 Sensitive lineage3 gb
ERR4816232 Other lineage4 None
ERR4816417 Other lineage4.9 None
ERR216901 Other lineage3.1.1 None
SRR3742667 Sensitive lineage4.9 None
ERR4816571 Other lineage1.1.2 None
ERR4817398 Other lineage3.1.1 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4817234 Other lineage4.1.1.3 None
ERR4816818 Other lineage4.8.2 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816856 Other lineage4.1.2.1 None
ERR4817735 Other lineage4.8 None
ERR4814905 Other lineage4.8 gb
SAMN02360581 HR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR4816184 Other lineage4.1.2.1 None
ERR2229760 Other lineage4.8 dk
ERR4817384 Sensitive lineage4.1.1.3 gb
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR2229791 RR-TB lineage4.9 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR4818050 Other lineage4.6.2.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
ERR2513082 Other lineage4.1.2.1 gb
ERR4819011 Other lineage3.1.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR2515055 Other lineage3 None
ERR4818272 Other lineage4.3.2 None
ERR4818212 Sensitive lineage4.6 gb
ERR2432997 Other lineage4.8 None
ERR4818214 Sensitive lineage4.1.2.1 gb
ERR4818232 Other lineage4.1.2 gb
ERR4818432 HR-TB lineage4.5 gb
ERR4818436 Other lineage4.8 None
ERR2513273 Other lineage4.1.2.1 None
ERR4818570 Other lineage4.3.3 None
SAMN02360577 HR-TB lineage3 None
ERR2446397 Sensitive lineage4.3.3 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4819166 Other lineage3 gb
ERR4820729 Other lineage2.2.1 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR2514351 Sensitive lineage3 gb
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR5217421 Sensitive lineage2.2.1 None
ERR4819723 Other None
ERR2514613 Other lineage4.8 gb
ERR2514668 Other lineage4.8.1 gb
ERR4821769 Other lineage4.1.2.1 None
ERR2514692 Other None
ERR4819834 Other lineage4.8 gb
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR6045420 Other lineage4.1.2.1 gb
ERR4821802 Other La3 gb
ERR2747678 Other La1.8.1 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4821371 Other lineage4.8 gb
ERR4822138 Other lineage4.1.2.1 None
ERR4821519 Other lineage3 gb
ERR4821718 Other lineage4.2.2.2 gb
SRR6045642 Other lineage3.1.2.2 None
ERR4821725 Other lineage4.8.2 gb
SRR5818466 Other lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR5818660 Sensitive lineage4.1.1.3 dj
SRR6045264 Sensitive lineage2.2.1 None
ERR4829907 HR-TB lineage4.1.2.1 it
SRR6046860 Other lineage4.4.1.1 None
ERR4829360 Sensitive lineage4.7 None
SRR6152838 Other lineage2.2.1.1 ca
ERR4872193 MDR-TB lineage4.6 None
SRR6046602 HR-TB lineage4.1.2.1 gb
SRR6832644 Other lineage4.3.3 None
SRR6650411 Sensitive lineage1.1.3.1 None
SRR7131129 Sensitive lineage4.1.2.1 None
SRR7131035 Sensitive lineage4.8 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
SRR7131296 Other lineage4.3.3 None
SRR7131156 Other lineage4.6 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR10796632 Other lineage4.3.3 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR10796636 Other lineage4.1.2.1 None
ERR4178161 Other lineage4.4.1.1 None
ERR3283008 Other lineage4.9 None
ERR3439225 Other La1.8.1 None
ERR3439268 Sensitive lineage4.9 None
ERR473279 Other lineage4.9 None
ERR4188280 Other La1.8.1 None
ERR4586795 Other La1.8.1 None
ERR6197021 MDR-TB lineage4.7;lineage4.3.4.2 None
ERR6865446 Other lineage4.4.1.1 None
ERR752034 Sensitive lineage2.2.1 None
ERR7821103 HR-TB lineage1.1.3.2 None
ERR9117747 HR-TB lineage4.8 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
ERR8665811 Pre-XDR-TB lineage2.2 None
ERR9119591 MDR-TB lineage4.6 None
ERR9117760 HR-TB lineage4.3 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013583 HR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013595 HR-TB lineage3 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013597 HR-TB lineage2.2 None
SRR1013599 HR-TB None
SRR1013596 HR-TB lineage3 None
SRR1013598 HR-TB None
SRR1013610 HR-TB lineage4 None
SRR1013607 HR-TB lineage2.2 None
SRR1013609 HR-TB lineage4 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013608 HR-TB lineage2.2 None
SRR1013611 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013618 MDR-TB None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR1013633 MDR-TB lineage2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048885 MDR-TB None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048982 HR-TB None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048994 HR-TB lineage4.9 None
SRR1048993 HR-TB lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1048995 HR-TB lineage4.5 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1049027 Pre-XDR-TB None
SRR1049041 MDR-TB None
SRR1173416 Other lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1172987 HR-TB lineage4.9 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1173720 Other lineage4.9 None