EBG00000313339 - n.2556G>T
Drug resistance types
5 Sensitive
6 RR-TB
7 HR-TB
3 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.8 | 5 |
| lineage2.2.1 | 6 |
| lineage4.6.5 | 2 |
| lineage4.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage3 | 3 |
| 3 | |
| lineage1.2.2.2 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage3.1.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046839 | Other | lineage4.9 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR14088393 | XDR-TB | lineage3 | None | SRR1173740 | Other | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR1173281 | RR-TB | lineage3 | None | ERR4815172 | Other | lineage1.2.2.2 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR228212 | Sensitive | lineage3.1.3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4819206 | Other | lineage4.8 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR2513879 | Sensitive | lineage4.8 | gb | ERR2513896 | Sensitive | lineage3.1.3 | gb | ERR1023509 | Other | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | SRR6046376 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None |
|---|
