EBG00000313339 - n.596A>T


Drug resistance types
51 Sensitive 30 RR-TB 12 HR-TB 14 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 95 Other
lineage Counts
lineage Count
4
lineage4.9 41
lineage2.2.1 19
lineage1.2.1.2.1 1
lineage1.1 1
lineage4.9;lineage4.4.2 1
lineage4.4.1.1 6
lineage4.1.2;lineage3.1 2
lineage1.2.1.2 1
La1.4 1
lineage4.1.1 5
lineage1.1.1 3
lineage4.1.2.1 11
lineage4.3.3 9
lineage4.8 23
lineage4.6.2.2 3
lineage3 14
lineage1.2.2.2 2
lineage4.6.1.1 5
lineage3.1.2.1 1
lineage4 6
lineage4.6.1 3
lineage1.1.2 2
lineage4.1.1.3 4
lineage4.3.2 2
lineage6.3.1 1
lineage2.2.1.1 1
lineage4.1.1.3.1;lineage3.1.2 1
lineage3.1 1
lineage4.7 1
lineage3.1.2.2 2
lineage4.3.2.1 5
lineage1.1.3.1 1
lineage4.2.2.2 1
lineage4.1.1.3.1 1
lineage4.4.1.2 1
lineage4;lineage2.2.1 1
lineage4.4 1
lineage4.3.4.2.1 1
lineage2.2 1
lineage4.3.4.2 1
La1.8.1 5
lineage4.2.1 1
La1.2 1
lineage4.3.4 1
lineage4.3.4.1 1
lineage4.1.4 1
La1.3 1
lineage1.1.3.2 1
lineage2.2.2 2
lineage3.1.3 1
lineage5.1.1 1
lineage4.6.1.2 1
lineage3.1.1 1
spoligotype Counts
spoligotype Count
None 209
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173740 Other None
SRR1173766 Sensitive lineage4.9 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR1173833 Other lineage4.9 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR12199472 Sensitive lineage1.1 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR12931742 HR-TB lineage4.4.1.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR16278274 Other La1.4 None
SRR18003031 HR-TB lineage2.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR22424905 RR-TB lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR21675637 Sensitive lineage4.3.3 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR176771 Sensitive None
ERR4815289 Other lineage3 None
ERR2229811 Other lineage4.8 dk
SRR3105736 Other lineage1.2.2.2 None
ERR2229733 Other lineage4.8 dk
ERR4815517 Other lineage1.2.2.2 None
SRR3675245 Other lineage4.1.2.1 None
ERR176547 Sensitive lineage4.6.1.1 None
ERR4815022 Other lineage3.1.2.1 None
ERR2229540 Other lineage4.8 None
ERR2229810 Other lineage4.8 None
ERR2229541 Other lineage4.8 None
ERR4816231 Other lineage4 None
SAMEA3501015 Other lineage4.8 None
ERR4816184 Other lineage4.1.2.1 None
ERR1199039 Sensitive lineage4.6.1 None
ERR2229147 Other lineage4.8 None
ERR2229436 Other lineage4.8 None
ERR1199021 Other lineage4.6.1.1 None
ERR4816571 Other lineage1.1.2 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816417 Other lineage4.9 None
ERR2229204 Other lineage4.8 None
ERR2229366 Other lineage4.8 None
ERR2228810 RR-TB lineage4 None
ERR2228890 Other lineage4 None
ERR2228838 RR-TB lineage4.8 None
ERR2228899 RR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2228900 RR-TB lineage4.8 None
ERR2228910 Other lineage4.8 None
ERR2512423 Other lineage4.1.1.3 None
ERR4818107 Sensitive lineage3 None
SAMEA3501063 RR-TB lineage4.8 None
ERR1199007 Sensitive lineage4.6.1.1 None
ERR4818831 Other lineage3 None
ERR1199009 Sensitive lineage4.6.1.1 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818272 Other lineage4.3.2 None
ERR1199001 Sensitive lineage4.6.1.1 None
ERR4818440 Other lineage6.3.1 None
ERR4820746 RR-TB lineage3 None
SRR5074711 Sensitive lineage4.3.3 None
ERR4819192 Other lineage3 None
ERR4820264 Other lineage1.1.2 None
ERR4819314 Other lineage1.1.1 None
ERR4817554 Other lineage1.1.1 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819198 Other lineage2.2.1 None
SRR6152838 Other lineage2.2.1.1 ca
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
ERR2514533 Other lineage4.9 None
SRR2024953 MDR-TB lineage2.2.1 cn
SAMEA3501070 RR-TB lineage4.8 None
ERR4821769 Other lineage4.1.2.1 None
ERR2515013 Sensitive lineage2.2.1 None
ERR4820092 Other lineage3 None
ERR4820193 Other lineage3 None
ERR2514968 Other lineage4.3.3 None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6045778 Other lineage3.1 None
ERR4821288 Other lineage4.7 None
SRR6045642 Other lineage3.1.2.2 None
SAMN02350456 Sensitive lineage4.3.2.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6046839 Other lineage4.9 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045976 Sensitive lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6046291 Other lineage3 None
SRR6046521 Other lineage4.4.1.1 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045124 Other lineage4.9 None
SRR6045267 RR-TB lineage4 None
SRR6046250 Other lineage4.9 None
SRR6046376 Other lineage3 None
ERR4828879 MDR-TB lineage3 None
ERR4814994 HR-TB lineage2.2.1 gb
SRR6397733 Other lineage4.4.1.2 None
ERR502470 RR-TB lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
SRR6397815 Other lineage4.4.1.1 None
ERR502485 Sensitive lineage4.9 None
ERR502482 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502483 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982414 Sensitive lineage4.9 None
SRR6982227 Other lineage4.1.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982195 RR-TB lineage4.4 None
SRR6982196 Sensitive None
SRR6982229 Sensitive lineage2.2.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6832644 Other lineage4.3.3 None
SRR6981993 Other lineage4.3.2.1 None
SRR6855851 Sensitive lineage4.3.4.2.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6982011 Other lineage4.1.1 None
SRR6982014 Other lineage4.1.1 None
SRR6855917 Other lineage4.8 None
SRR6982035 Sensitive lineage4.9 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982075 Sensitive lineage3 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982558 Other lineage4.3.4.2 None
SRR7131050 MDR-TB lineage4.3.3 None
SRR7131047 MDR-TB lineage4.3.3 None
SRR7131296 Other lineage4.3.3 None
SRR7131109 Pre-XDR-TB lineage4.8 None
SRR7131169 Other lineage4.1.2.1 None
SRR7535054 Sensitive lineage4.6.1 None
SRR7535080 HR-TB lineage4.8 None
SRR7645936 Sensitive lineage2.2.1 None
SRR8600046 Other La1.8.1 None
SRR8600107 Other La1.8.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR8600288 Other La1.8.1 None
ERR017781 Other lineage3 None
SRR7851312 Other La1.2 None
ERR019855 Other lineage3 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR10796597 Other lineage4 None
ERR10796632 Other lineage4.3.3 None
ERR3283048 HR-TB lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR3324347 Sensitive lineage4.1.2.1 None
ERR4819175 Other lineage4.1.1.3 gb
ERR10796631 Other lineage4.3.4 None
ERR3283013 MDR-TB lineage4 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR4178161 Other lineage4.4.1.1 None
ERR4769527 Sensitive lineage4.9 None
ERR4586795 Other La1.8.1 None
ERR4769506 Sensitive La1.3 None
ERR4769525 Sensitive lineage4.9 None
ERR4627379 Other La1.8.1 None
ERR2514801 Other lineage1.1.3.2 gb
ERR5987263 MDR-TB lineage2.2.1 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6197030 Other lineage4.9 None
ERR6197024 RR-TB lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6197040 Other lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR9117826 Other lineage3.1.3 None
ERR736816 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
ERR6865446 Other lineage4.4.1.1 None
ERR6866241 Other lineage4.3.2 None
ERR6866821 Sensitive lineage4.1.2.1 None
SRR1049030 Pre-XDR-TB lineage4.9 None
ERR987757 MDR-TB lineage4.6.1.2 None
SRR023450 RR-TB lineage2.2.1 None
SRR023487 RR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR1062865 HR-TB lineage2.2.2 None
SRR1049031 HR-TB lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1173281 RR-TB lineage3 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1172987 HR-TB lineage4.9 None
SRR1173139 Sensitive lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1 None
SRR1173421 RR-TB lineage4.9 None