EBG00000313339 - n.596A>T
Drug resistance types
59 Sensitive
30 RR-TB
14 HR-TB
16 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 26 |
| lineage4 | 6 |
| lineage4.5 | 2 |
| lineage4.1.1.3 | 5 |
| lineage4.6.1.1 | 5 |
| lineage3 | 15 |
| lineage6.3.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.3.3 | 9 |
| lineage4.1.2.1 | 14 |
| lineage1.1.1 | 4 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 23 |
| lineage4.9 | 41 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1 | 7 |
| lineage4.3.2.1 | 5 |
| lineage4.7 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage3.1.2.2 | 2 |
| lineage3.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| 4 | |
| lineage2.2.2 | 3 |
| lineage4.4.1.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.4 | 1 |
| lineage4.1.1 | 6 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.3.4.2 | 1 |
| La1.8.1 | 5 |
| lineage4.6.1 | 3 |
| lineage4.2.1 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.4 | 1 |
| La1.3 | 1 |
| lineage3.1.3 | 1 |
| lineage5.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 31 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229436 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR4818107 | Sensitive | lineage3 | None | ERR1199009 | Sensitive | lineage4.6.1.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818440 | Other | lineage6.3.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR4818912 | Other | lineage4.8 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2512660 | Sensitive | lineage3 | gb | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4820264 | Other | lineage1.1.2 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819198 | Other | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819192 | Other | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2514533 | Other | lineage4.9 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514328 | Sensitive | lineage4.1.2.1 | gb | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820092 | Other | lineage3 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2515013 | Sensitive | lineage2.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR4820076 | Other | lineage1.1.1 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821865 | Other | lineage2.2.1 | gb | ERR4821154 | Other | lineage2.2.1 | gb | ERR4822074 | MDR-TB | lineage2.2.1 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822203 | Sensitive | lineage4.4.1.1 | gb | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6045572 | Sensitive | lineage4.6.3 | gb | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045976 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982196 | Sensitive | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR8600046 | Other | La1.8.1 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR8600107 | Other | La1.8.1 | None | ERR017781 | Other | lineage3 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR019855 | Other | lineage3 | None | ERR10796597 | Other | lineage4 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR751345 | Other | lineage5.1.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR12931742 | HR-TB | lineage4.4.1.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815289 | Other | lineage3 | None | SRR22424905 | RR-TB | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR176771 | Sensitive | None | ERR4814524 | Other | lineage4.1.1 | gb | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4814723 | Sensitive | lineage4.1.2.1 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814905 | Other | lineage4.8 | gb | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR2229541 | Other | lineage4.8 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR2229540 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4816231 | Other | lineage4 | None | ERR2229810 | Other | lineage4.8 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4817043 | Sensitive | lineage4.8.2 | gb | ERR2229147 | Other | lineage4.8 | None | ERR4816417 | Other | lineage4.9 | None | ERR1199021 | Other | lineage4.6.1.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229204 | Other | lineage4.8 | None | ERR2229349 | Sensitive | lineage4.8 | dk | ERR4816571 | Other | lineage1.1.2 | None | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2229366 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None |
|---|
