EBG00000313339 - n.596A>T
Drug resistance types
37 Sensitive
29 RR-TB
5 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG;lineage4.9 | 6 |
| lineage4.1.2.1 | 6 |
| lineage4.6.1.1 | 5 |
| lineage4.9 | 27 |
| lineage4.8 | 38 |
| lineage3 | 6 |
| lineage1.1.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1 | 12 |
| lineage4.2.1 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage6.3.1 | 1 |
| lineage1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.3 | 3 |
| La1.4 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1.1 | 1 |
| La1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3.1.2.1 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229541 | Other | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | ERR4818831 | Other | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR560449 | Other | La1.2.BCG;lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR7504782 | Sensitive | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR7444074 | Sensitive | lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR176741 | Other | lineage4.9 | None | SRR1208441 | Sensitive | lineage4.9 | None | ERR1199039 | Sensitive | lineage4.6.1.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR560439 | Other | lineage4.9 | None | SRR1173361 | MDR-TB | lineage4.6.1.1 | None | ERR978693 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR1208563 | Sensitive | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR2229366 | Other | lineage4.8 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR1208660 | Sensitive | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR1208990 | Sensitive | lineage4.9 | None | SRR7535080 | Sensitive | lineage4.8 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR10614047 | Sensitive | lineage4.9 | None | ERR560438 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | ERR560448 | Other | La1.2.BCG;lineage4.9 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR7504779 | Sensitive | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR2229436 | Other | lineage4.8 | None | SRR7069391 | Other | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR978762 | Other | lineage4.8 | None | SRR6046250 | Other | lineage4.9 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR4820193 | Other | lineage3 | None | SRR1173281 | Other | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR7504773 | Sensitive | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR7444084 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR7504776 | Sensitive | lineage4.9 | None | SRR8600288 | Other | La1.8.1 | None | ERR10796632 | Other | lineage4.3.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR019855 | Other | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR1208888 | Sensitive | lineage4.9 | None | SRR7504786 | Sensitive | lineage4.9 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4815022 | Other | lineage3.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR1202405 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR1199021 | Other | lineage4.6.1.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR7444103 | Sensitive | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None |
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