Rv1630 - c.1077G>C


Drug resistance types
5 Sensitive 8 RR-TB 13 HR-TB 20 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 90 Other
lineage Counts
lineage Count
lineage4.7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
lineage2.1;lineage4.9;lineage6.3 6
lineage4.9 23
lineage3 5
lineage4 2
lineage2.2;lineage4.9 1
lineage2.2.1 11
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.1.2.1 8
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.3.4.2.1 1
lineage4.1.3 2
lineage1.2.1.2 1
La1.7;lineage4.9 4
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage4.9 11
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.8.1 1
La1.7 2
lineage2.1 4
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage6.1.3 1
La1.7;M.canetti;lineage4.9 2
lineage4.1.1.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
13
La3;lineage2.1;lineage6.3 1
lineage4.9;lineage6.3 2
La3;M.canetti;lineage2.2.1 1
lineage4.8 3
lineage2.1;lineage6.3 2
lineage4.2.2.2 1
lineage1.2.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2 1
La1.8.1 1
lineage2.2.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage4.3.3 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage2.2.1;lineage3 1
lineage4.4.1.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 141
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819932 Other lineage4.7 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816322 Other lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR2446509 Other lineage3 nl
SRR1184312 Other lineage2.2.1 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR4820335 Other lineage4.1.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6785263 Sensitive lineage2.2.1 None
SRR20969475 Other lineage1.2.1.2 None
ERR3275190 Other lineage3 nl
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1172728 RR-TB La3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
SRR3675457 Other lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675222 Other La1.7 None
SRR3416776 Other lineage2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675572 Other None
SRR1175074 Other None
ERR4815604 Other None
ERR9117709 Other None
SRR25827682 Other None
SRR3675236 Other None
ERR1035157 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR6046305 Sensitive lineage4.9 None
ERR2229084 Sensitive lineage4.8 dk
SRR3675465 Other lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR4814352 Other lineage2.2.1 None
ERR4830353 HR-TB La1.7 None
SRR7236330 Other La1.8.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6785267 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR16156775 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR7131023 Other lineage4.1.2.1 None
SRR6789626 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
ERR4816852 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6785413 Other lineage2.2.1 None
ERR4769433 RR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046250 Other lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR6789621 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18911450 Sensitive lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4821578 Sensitive lineage4.1.2.1 None
ERR2229542 Other lineage4.8 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR1184372 MDR-TB None
ERR4817060 Other None
SRR3675275 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797069 Other lineage4.9 None