Rv1630 - c.1077G>C
Drug resistance types
5 Sensitive
8 RR-TB
13 HR-TB
20 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 8 |
| lineage4.8 | 3 |
| lineage3 | 5 |
| lineage2.1 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9 | 23 |
| La3 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.1;lineage4.9 | 11 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 13 | |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.1 | 11 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La1.7;lineage4.9 | 4 |
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2 | 1 |
| La1.8.1 | 1 |
| lineage4.1.3 | 2 |
| La1.7 | 2 |
| lineage6.1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.7 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.8.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821578 | Sensitive | lineage4.1.2.1 | None | ERR2229542 | Other | lineage4.8 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR3416776 | Other | lineage2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675572 | Other | None | ERR4815604 | Other | None | ERR4816852 | Other | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4817735 | Other | lineage4.8 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR6046305 | Sensitive | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR2446509 | Other | lineage3 | nl | SRR1184312 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR6046066 | Other | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR7236330 | Other | La1.8.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR16156775 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR1175074 | Other | None | ERR9117709 | Other | None | SRR25827682 | Other | None | ERR1035157 | Other | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR3675549 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819932 | Other | lineage4.7 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1173778 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR7496472 | Other | lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR18911450 | Sensitive | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR6789626 | Other | None | SRR7535086 | Other | None | SRR18213713 | HR-TB | None | SRR3675236 | Other | None | ERR4816999 | Other | None | ERR4817060 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4800341 | HR-TB | lineage3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4769493 | Other | lineage4.9 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR3283044 | Other | lineage4 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1173118 | Other | lineage2.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR6789621 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3275190 | Other | lineage3 | nl | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6785267 | Other | lineage2.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None |
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