Rv0668 - c.1029G>C


Drug resistance types
17 Sensitive 17 RR-TB 57 HR-TB 25 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 7 Other
lineage Counts
lineage Count
lineage2.2.2 22
lineage2.2.1 31
lineage4.9 21
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 3
lineage3 11
lineage4.6.5 2
M.canetti;lineage4.9 1
lineage3.1.3 1
lineage2.2;lineage4.9 1
lineage2 1
lineage2.2.2;lineage4 5
lineage4.1.2.1.1 1
lineage4.8 3
lineage4 3
La1.7.X-unk4 1
lineage2.2;lineage4 2
lineage2;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage2.2.2 4
lineage2.2.1.1;lineage4 1
lineage2;lineage4 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.5 3
La2;lineage2.2 1
lineage4.3.3 1
La2;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.2.1.1 2
lineage2.2.1;lineage4 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
1
lineage2.1;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4.9 1
La1.2 1
lineage4.3.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 141
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013607 HR-TB lineage2.2.2 None
SRR1013602 HR-TB lineage2.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1048965 HR-TB lineage2.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR1013596 Sensitive lineage3 None
ERR4821053 RR-TB lineage3 None
ERR7801175 HR-TB lineage4.6.5 None
SRR1013614 Sensitive lineage2.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
SRR1049040 HR-TB lineage2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1013608 Sensitive lineage2.2.2 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
ERR3445487 Other La1.7.X-unk4 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048992 HR-TB lineage2.2;lineage4 None
SRR1048853 HR-TB lineage2;lineage4.9 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1048981 HR-TB lineage3 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1144744 HR-TB lineage2.2.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SAMN02360585 HR-TB lineage4.5 None
SRR1049023 HR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1047996 MDR-TB lineage2.2.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4769530 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
SRR1047993 HR-TB lineage2.2.1 None
SRR18511647 Sensitive lineage2.2.1 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4816322 Other lineage4.9 None
SRR1144809 HR-TB lineage2.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1048985 HR-TB lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1013609 Sensitive lineage4 None
ERR4769439 HR-TB lineage4.9 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR15315797 RR-TB lineage2.2.1 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1048982 HR-TB lineage2.2.1.1 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4769442 Sensitive lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR4817069 RR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR3675507 RR-TB lineage4.9 None
SRR1013604 HR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1013613 Sensitive lineage2.2.1 None
SRR1013612 Sensitive lineage4.5 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4815556 RR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1048994 HR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR1049004 HR-TB lineage2.2.2 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR067712 Sensitive lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1048996 Sensitive lineage4.5 None
ERR4769508 RR-TB lineage4.9 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1048987 HR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR6046250 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR4816470 HR-TB lineage3 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR1048993 HR-TB lineage4.9 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2.2 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1048975 HR-TB lineage2.2.1 None
SAMN02360577 HR-TB lineage3 None
ERR978766 RR-TB lineage4.8 None
ERR4769444 HR-TB lineage4.9 None
ERR4769418 Other La1.2 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR1048997 HR-TB lineage2.2.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1049006 HR-TB lineage2.2.2;lineage4 None
ERR4815815 Sensitive lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR6045359 HR-TB lineage4.9 None