Rv0668 - c.1029G>C
Drug resistance types
8 Sensitive
17 RR-TB
78 HR-TB
26 MDR-TB
37 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.5 | 2 |
| lineage4 | 12 |
| lineage4.9 | 32 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.1 | 38 |
| lineage4.7 | 1 |
| lineage2.2 | 24 |
| lineage2.2.2 | 20 |
| lineage3 | 11 |
| 18 | |
| lineage2.2.1.1 | 2 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.9;lineage2 | 1 |
| La1.6 | 1 |
| lineage4.8 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1.8.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.1.1.3 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 183 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013598 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013618 | MDR-TB | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048982 | HR-TB | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049026 | Pre-XDR-TB | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1049041 | MDR-TB | None | SRR10993951 | RR-TB | La1.6 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR4815556 | RR-TB | lineage3 | None | ERR181824 | HR-TB | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675545 | HR-TB | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR3742667 | Sensitive | lineage4.9 | None | SRR3675558 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816470 | Other | lineage3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819910 | Other | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4821195 | Sensitive | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046514 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046482 | HR-TB | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR294248 | HR-TB | None | ERR036207 | Other | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3439265 | Other | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
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