EBG00000313325 - n.1002delG
Drug resistance types
6 Sensitive
5 RR-TB
0 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 3 |
| lineage4.9 | 6 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1 | 4 |
| lineage4.7 | 2 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1 | 1 |
| lineage3 | 5 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.3.2 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675245 | Other | lineage4.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | SRR3675256 | Other | lineage4.7 | None | ERR2027220 | Other | lineage3.1.3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4818952 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | ERR4818272 | Other | lineage4.3.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2512599 | Other | lineage3 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR2513910 | Other | lineage3 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR2851359 | Other | lineage4.9 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | ERR3324345 | RR-TB | lineage4.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | ERR3275190 | Other | lineage3 | nl | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR13199739 | Other | La1.7.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None |
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