EBG00000313339 - n.1077G>A
Drug resistance types
18 Sensitive
44 RR-TB
19 HR-TB
35 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
213 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 27 |
| lineage2.2.1 | 62 |
| lineage4.3.4.1 | 3 |
| lineage4.2.2.2 | 5 |
| lineage4.1.2;lineage3.1 | 1 |
| lineage4.1.2.1 | 44 |
| lineage4.3.3 | 17 |
| lineage4.8 | 33 |
| lineage4.3.4.2 | 6 |
| lineage4.6.2.2 | 7 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1 | 3 |
| lineage2.2.1.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage3 | 32 |
| lineage2.2.2 | 4 |
| lineage4.1.2 | 4 |
| lineage4.3.4 | 1 |
| lineage4 | 9 |
| lineage4.3.4.2.1 | 7 |
| lineage1.1.3.2 | 1 |
| La1.8.1 | 1 |
| lineage4.3 | 1 |
| lineage4.3.2 | 5 |
| lineage1.1.3.3 | 3 |
| lineage3.1.3 | 3 |
| lineage4.3.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| 9 | |
| lineage4.8.1 | 1 |
| La2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.4.2 | 4 |
| lineage4.7 | 4 |
| lineage6.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.1.3 | 1 |
| lineage1.1.3.1 | 4 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.1 | 2 |
| lineage3.1.1 | 5 |
| lineage5 | 2 |
| lineage3.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage1.1.2 | 3 |
| lineage2.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage3.1.2 | 1 |
| La3 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 352 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7131031 | Other | lineage4.2.2.2 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131097 | Sensitive | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131221 | Other | lineage4.6.2.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | ERR4819166 | Other | lineage3 | gb | SRR9971223 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4819324 | Other | lineage4.8 | gb | ERR10796578 | Other | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | ERR10796636 | Other | lineage4.1.2.1 | None | ERR4820891 | Sensitive | lineage4.9 | gb | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4821812 | Sensitive | lineage4.8 | gb | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4586795 | Other | La1.8.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR4798769 | Other | lineage1.1.3.3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR10315588 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140942 | Other | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR16058205 | HR-TB | lineage2.2.1 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18913779 | Other | lineage3 | None | SRR19303805 | Other | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303876 | Other | lineage4.7 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR21595944 | Other | lineage2.2.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR21659828 | Sensitive | lineage4.1.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303907 | Other | lineage4.8 | None | SRR19304104 | Other | lineage4.8 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR22048375 | Other | lineage4.1.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4815613 | Other | lineage3 | None | SRR8692800 | Other | lineage4 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815104 | Other | lineage4.8 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4814341 | Other | lineage4.7 | None | ERR4815636 | Other | lineage4.1.2.1 | None | ERR4815618 | Other | lineage4.8 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4815467 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675265 | Other | lineage4 | None | ERR4814856 | Sensitive | lineage4.1.2.1 | None | ERR4815738 | Other | lineage3 | None | SRR3675282 | Other | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4814923 | Other | lineage4.3.2 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675513 | Other | lineage4.8 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816232 | Other | lineage4 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR3675565 | Other | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816464 | Other | lineage3 | None | ERR4816477 | Other | lineage4.8 | None | ERR4816627 | Other | lineage2.2 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816562 | Other | lineage4 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4818663 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817874 | Other | lineage3 | None | ERR4817895 | Other | lineage4.1.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2512536 | Other | lineage3.1.3 | None | ERR4819078 | Other | lineage4.3.3 | None | ERR2512606 | MDR-TB | lineage3 | None | SRR5067395 | HR-TB | lineage4.1.2.1 | vn | ERR4818810 | Other | lineage2.2.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007172 | Sensitive | lineage4.1.2.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4819058 | HR-TB | lineage3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817568 | Other | lineage4.1.2.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4819192 | Other | lineage3 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819269 | Sensitive | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819287 | Other | lineage1.1.3.3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR7911143 | MDR-TB | lineage4.1.2.1 | vn | ERR4820324 | Other | lineage4 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514261 | Other | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819550 | Other | lineage3 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819955 | Other | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4819982 | RR-TB | lineage2.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820194 | Other | La3 | None | ERR4820833 | HR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820953 | Other | lineage4.3.3 | None | ERR4821093 | Other | lineage4.3.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4822093 | Sensitive | lineage4.1.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821310 | Other | lineage5 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821610 | Other | lineage4.3.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821722 | Other | lineage2.2.1 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045928 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044993 | Other | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045952 | HR-TB | None | SRR6046020 | Other | lineage3 | None | SRR6045986 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046050 | Other | lineage4.3.3 | None | SRR6045327 | HR-TB | None | SRR6046208 | Other | lineage4 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829261 | Other | lineage2.2.1 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829289 | Other | lineage4.1.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046482 | HR-TB | None |
|---|
