EBG00000313339 - n.1077G>A


Drug resistance types
18 Sensitive 44 RR-TB 19 HR-TB 35 MDR-TB 23 Pre-XDR-TB 0 XDR-TB 213 Other
lineage Counts
lineage Count
lineage4 9
lineage4.8 33
lineage4.1.1.3 4
lineage3 32
lineage4.1.2.1 44
lineage1.1.3.1 4
lineage4.4.2 4
lineage4.7 4
lineage4.9 27
lineage4.1.3 1
lineage4.3.3 17
lineage2.2.1 62
lineage4.9;lineage3.1.1 1
lineage4.6.5 1
9
lineage4.1 2
lineage2.2.1.1 3
lineage1.2.1.1 1
lineage4.3.4.2 6
lineage5 2
lineage3.1.1 5
lineage4.2.2.2 5
lineage4.3.2 5
lineage3.1 1
lineage1.1.2 3
lineage4.6.1.2 1
lineage4.1.2 4
lineage2.2 1
lineage3.1.2.1 2
lineage1.1.3.3 3
lineage4.5 2
lineage4.6.2.2 7
lineage3.1.3 3
lineage4.2.1.1 1
lineage4.3.4.1 3
lineage4.4.1.1 4
lineage3.1.2 1
lineage4.3.4.2.1 7
La3 1
lineage4.1.1 3
lineage4.2.2.2;lineage3 1
lineage4.1.1.3.1 1
lineage4.8.2 1
lineage1.2.2.2 1
lineage4.1.2;lineage3.1 1
lineage4.3.2.1 1
lineage2.2.2 4
lineage4.4.1.1.1 1
lineage4.3.4 1
lineage1.1.3.2 1
La1.8.1 1
lineage4.3 1
lineage4.3.1.1 1
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.8.1 1
La2 1
lineage2.2.2;lineage2.2.1 1
lineage4.2.2 1
lineage6.1.1 1
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 352
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8692800 Other lineage4 None
ERR4815268 Other lineage4.8 None
SRR3675475 Other lineage4.1.1.3 None
ERR4815613 Other lineage3 None
ERR4815104 Other lineage4.8 None
ERR4815165 Other lineage4.1.2.1 None
ERR4815618 Other lineage4.8 None
ERR4814617 Other lineage1.1.3.1 None
ERR4815301 Other lineage4.4.2 None
ERR4814341 Other lineage4.7 None
ERR4814362 Other lineage4.8 None
ERR4814584 Sensitive lineage4.4.2 None
ERR4815636 Other lineage4.1.2.1 None
ERR4815777 Other lineage4.9 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4815452 Other lineage4.3.3 None
ERR4814623 Other lineage4.8 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4815467 Other lineage3 None
SRR3675230 RR-TB lineage3 None
ERR4814763 Other lineage2.2.1 None
ERR4814745 Other lineage4.6.5 None
SRR3675282 Other None
ERR4814767 MDR-TB lineage2.2.1 None
ERR4815502 Other lineage4.1 None
SRR3675265 Other lineage4 None
ERR4814856 Sensitive lineage4.1.2.1 None
ERR4814841 Other lineage4.1 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815738 Other lineage3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4814911 Other lineage4.3.3 None
ERR4814986 Other lineage4.3.4.2 None
ERR4815080 Other lineage4.1.2.1 None
ERR4816967 RR-TB lineage5 None
ERR4817464 Other lineage3.1.1 None
SRR3675513 Other lineage4.8 None
ERR4816086 Other lineage4.2.2.2 None
ERR4814923 Other lineage4.3.2 None
ERR4814952 Sensitive lineage3 None
ERR4816184 Other lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675565 Other lineage3 None
ERR4816227 RR-TB lineage3 None
ERR4816243 Sensitive lineage3 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816232 Other lineage4 None
ERR4816270 Other lineage4.1.2.1 None
ERR4816510 Other lineage4.1.2.1 None
ERR4817070 Other lineage1.1.2 None
ERR4816477 Other lineage4.8 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816464 Other lineage3 None
ERR4817134 HR-TB lineage2.2.1 None
ERR4816531 Other lineage4.1.2 None
ERR4817131 Pre-XDR-TB None
ERR4816627 Other lineage2.2 None
ERR4816562 Other lineage4 None
ERR4817398 Other lineage3.1.1 None
ERR4817435 Other lineage1.1.3.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR2229791 RR-TB lineage4.9 None
ERR4817189 Other lineage4.7 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4817665 Other lineage4.8 None
ERR4816856 Other lineage4.1.2.1 None
ERR4818691 Other lineage4.8 None
ERR4818663 Other lineage3 None
ERR4817751 Other lineage1.1.3.3 None
ERR4818655 Other lineage4.3.3 None
ERR4817803 Other lineage4.2.2.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817826 RR-TB lineage4.5 None
ERR4817874 Other lineage3 None
ERR4817895 Other lineage4.1.2.1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4819002 HR-TB lineage4.8 None
ERR4819007 Other lineage2.2.1 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR4818050 Other lineage4.6.2.2 None
ERR4819087 Other lineage4.3.3 None
ERR2512536 Other lineage3.1.3 None
ERR4818810 Other lineage2.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4819078 Other lineage4.3.3 None
ERR4818407 Other lineage4.3.2 None
ERR2512606 MDR-TB lineage3 None
ERR2513231 RR-TB lineage4.3.4.2 None
SRR5067395 HR-TB lineage4.1.2.1 vn
ERR4818507 RR-TB lineage4.1.2.1 None
ERR2512849 RR-TB lineage1.1.3.1 None
ERR4818548 Other lineage4.3.3 None
ERR4818556 Other lineage3 None
ERR4818570 Other lineage4.3.3 None
SRR5007172 Sensitive lineage4.1.2.1 None
ERR2512872 Sensitive lineage4.2.1.1 None
ERR2513743 Other lineage4.1.2 None
SRR5007204 Other lineage4.1.2.1 None
ERR4817568 Other lineage4.1.2.1 None
ERR4819058 HR-TB lineage3 None
ERR2513681 Other lineage1.1.2 None
ERR4817584 MDR-TB lineage3 None
ERR2512941 Other lineage1.1.2 None
ERR4819192 Other lineage3 None
ERR4820720 Other lineage4.1.2.1 None
ERR4819191 Other lineage4.6.2.2 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819198 Other lineage2.2.1 None
ERR4820265 Other lineage4.1.2.1 None
ERR2513830 RR-TB lineage4.8 None
ERR4819287 Other lineage1.1.3.3 None
ERR4819269 Sensitive lineage3 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR7911143 MDR-TB lineage4.1.2.1 vn
ERR4819528 RR-TB lineage3 None
ERR4820324 Other lineage4 None
ERR2514261 Other lineage3 None
ERR4819550 Other lineage3 None
ERR4820746 RR-TB lineage3 None
ERR2514533 Other lineage4.9 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819593 Other lineage4.5 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819636 Other lineage3.1.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820478 Other lineage3.1.3 None
ERR2514645 Other lineage4.3.4.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819955 Other lineage3 None
ERR4819863 RR-TB lineage4.9 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819982 RR-TB lineage2.2.1 None
ERR4820030 Other lineage4.9 None
ERR2515032 Other lineage3 None
ERR4820829 Other lineage4.8 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820833 HR-TB None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820194 Other La3 None
ERR4820151 RR-TB lineage4.8 None
ERR4821769 Other lineage4.1.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4820953 Other lineage4.3.3 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821093 Other lineage4.3.3 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045553 RR-TB lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR4821214 RR-TB None
ERR4821245 Other lineage4.1.2.1 None
ERR4821119 Other lineage4.4.1.1 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821286 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4821477 Other lineage4.8 None
ERR4822093 Sensitive lineage4.1.1 None
ERR4821526 Other lineage4.3.2 None
ERR4822170 Other lineage4.1.1.3 None
ERR4822167 Other lineage4.6.2.2 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821610 Other lineage4.3.2 None
SRR6045621 Other lineage4.1.1.3 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045591 Other lineage4.1.2.1 None
ERR4821679 Other lineage4.3.3 None
ERR4821722 Other lineage2.2.1 None
SRR6046210 Other lineage4 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044838 Other lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045909 Other lineage4.8 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045928 Other lineage4.9 None
SRR6045986 Other lineage3 None
SRR6044993 Other lineage3 None
SRR6045952 HR-TB None
SRR6046159 Other lineage4.8.2 None
SRR6046050 Other lineage4.3.3 None
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6046208 Other lineage4 None
SRR6045248 Other lineage3.1.1 None
SRR6046343 Other lineage2.2.1 None
SRR6045327 HR-TB None
SRR6045384 Other lineage4.1.2 None
SRR6046359 Other lineage4.7 None
ERR502479 RR-TB lineage4.9 None
ERR4829208 RR-TB lineage4.8 None
ERR4829261 Other lineage2.2.1 None
ERR4829337 Other lineage4.8 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR2851354 RR-TB lineage4.9 None
ERR4829289 Other lineage4.1.2.1 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046482 HR-TB None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131031 Other lineage4.2.2.2 None
SRR7131061 Other lineage2.2.1 None
SRR7131075 Other lineage4.8 None
SRR7131098 MDR-TB lineage4.3.3 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131026 Other lineage2.2.1 None
SRR7131097 Sensitive lineage2.2.1 None
SRR7131123 Other lineage4.8 None
SRR7131195 Other lineage2.2.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131161 Other lineage4.8 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131221 Other lineage4.6.2.2 None
SRR7131216 Other lineage4.1.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
ERR10796568 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR9971223 Other lineage2.2.1 None
ERR4819166 Other lineage3 gb
ERR4819324 Other lineage4.8 gb
ERR10219876 Other lineage4.3.4.2 None
ERR10796559 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796596 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR4820736 Sensitive lineage4.1.2.1 gb
ERR10796626 Other lineage4.1.2 None
ERR10796631 Other lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR2512841 HR-TB lineage2.2.1 gb
ERR2513082 Other lineage4.1.2.1 gb
ERR4821812 Sensitive lineage4.8 gb
ERR4820891 Sensitive lineage4.9 gb
ERR4821917 Sensitive lineage1.1.3.2 gb
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR2514351 Sensitive lineage3 gb
ERR4586795 Other La1.8.1 None
ERR2513819 Pre-XDR-TB lineage4.3.3 gb
ERR6197024 RR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR9117760 HR-TB lineage4.3 None
ERR6197032 Other lineage4.9 None
ERR9117711 Other lineage4.3.4.2.1 None
ERR9117781 Other lineage3.1.3 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR9117812 Other lineage4.3.1.1 None
SRR10315588 HR-TB lineage2.2.1 None
SRR1049672 Other lineage3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173770 Other lineage4.9 None
SRR1140942 Other None
SRR1173170 Other lineage4.9 None
SRR13180206 Sensitive lineage4.8 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR16058205 HR-TB lineage2.2.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR16156751 RR-TB lineage4.9 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002980 Other lineage2.2.1 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR18002987 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR18003049 Other lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR19303808 Sensitive lineage4.1.2.1 None
SRR19303805 Other lineage4.8 None
SRR19303876 Other lineage4.7 None
SRR19303815 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19303899 Other lineage3 None
SRR19303907 Other lineage4.8 None
SRR19303917 Other lineage2.2.1 None
SRR19303985 Other lineage4.8 None
SRR21595944 Other lineage2.2.1 None
SRR19304104 Other lineage4.8 None
SRR21659828 Sensitive lineage4.1.2.1 None
SRR21658552 Other lineage6.1.1 None
SRR22048536 Other lineage4.3.3 None
SRR21727888 Other lineage1.2.1.2 None
SRR22048375 Other lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None