EBG00000313339 - n.1037C>T
Drug resistance types
7 Sensitive
18 RR-TB
5 HR-TB
26 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 40 |
| lineage2.2.2 | 5 |
| lineage4.2.1.1 | 1 |
| lineage4 | 3 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.1.3 | 2 |
| lineage4.9 | 19 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3 | 5 |
| lineage4.3.4.2.1 | 6 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 10 |
| La1.6 | 1 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2.2 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage3 | 7 |
| lineage4.7 | 1 |
| lineage4.2.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.5 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR4811708 | HR-TB | lineage4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR6044841 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276954 | Pre-XDR-TB | lineage2.2.1 | None | SRR24083671 | Sensitive | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR10796589 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR26112516 | Sensitive | lineage2.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR867569 | Other | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR7070144 | Other | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR19304104 | Other | lineage4.8 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR10796592 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR20969820 | HR-TB | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR21728179 | Sensitive | lineage2.2.1 | None | SRR7069074 | Other | lineage3 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR5067249 | Sensitive | lineage2.2.1 | vn | ERR4819383 | RR-TB | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR19303899 | Other | lineage3 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR867555 | Other | lineage3 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR21685247 | Sensitive | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | DRR184629 | Other | lineage2.2.1 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None |
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