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SRA data
EBG00000313325
- n.1018dupT
Drug resistance types
0 Sensitive
1 RR-TB
12 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
10
lineage2.2.1
3
lineage4.8
1
lineage1.2.1.2.1
1
lineage2.2.2
1
lineage1;lineage4.9
1
La1.7.1;lineage4.9
1
lineage2.2.1.1
1
lineage4.3.4
1
La1.7.1;La1.7.X-unk4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063849
HR-TB
lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR176651
Other
lineage4.9
None
ERR176778
HR-TB
lineage4.9
None
ERR176779
HR-TB
lineage4.9
None
ERR181824
HR-TB
lineage4.9
None
ERR181887
Other
lineage4.9
None
ERR212125
HR-TB
lineage4.9
None
Showing 1 to 10 of 21 entries
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