EBG00000313325 - n.1018dupT
Drug resistance types
0 Sensitive
2 RR-TB
14 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 1 |
| lineage4 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1 | 7 |
| lineage2.2.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 1 |
| 9 | |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 25 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | SRR12199416 | HR-TB | lineage1.2.1.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3445503 | HR-TB | None | ERR1063859 | HR-TB | None |
|---|
