EBG00000313325 - n.1445delCinsTTT


Drug resistance types
0 Sensitive 25 RR-TB 2 HR-TB 92 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 36 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.8 6
M.canetti;lineage2.1;lineage4.9 22
lineage4.4.2 2
lineage1.2.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.3.2 1
lineage4.1.2.1 10
lineage4.5 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2.1 21
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage3 5
lineage4.8.1 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 19
lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.4.1.1 4
lineage1.2.1.2.1 1
lineage2.1;lineage4.9;lineage6.3 2
lineage2.2.1;lineage2.2.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.7.1 1
lineage4.3.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage4.3.4.2 1
lineage2.2.1.1 1
M.canetti;lineage2.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.2.1;lineage4 2
La3 1
lineage2.2.2 3
M.canetti;lineage2.2 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.1.1.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage3 1
lineage4.6.4 2
lineage2.1;lineage2.2;lineage6.3 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 166
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19304104 Other lineage4.8 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR18003007 MDR-TB lineage4.5 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR5979407 Other lineage3 None
SRR7070087 Other lineage4.8.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR18002967 HR-TB lineage2.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5485510 RR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR18003045 Other lineage2.2.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR1167055 Other lineage4.1.2.1 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR7131123 Other lineage4.8 None
SRR18002909 MDR-TB lineage2.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR5007163 Other lineage3;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4863405 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18002937 Other lineage2.2.1 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR18002963 Other lineage2.2.1 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675582 Other lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
SRR7069946 Other lineage4.8 None
ERR2600422 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR7070154 Other lineage4.4.1.1 None
ERR10796553 Other lineage4.9 None
SRR7069027 MDR-TB lineage4.3.4.2 None
SRR5485511 RR-TB lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5485522 RR-TB lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR11972311 Other lineage2.2.1;lineage4 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR10321138 Other La3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR6045909 Other lineage4.8.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR10796571 Other lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2517528 RR-TB lineage3 nl
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR5485513 RR-TB lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044841 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR6045986 Other lineage3 None
SRR3675509 Other lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675389 Other lineage4.9 None
SRR18002980 Other lineage2.2.1 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045621 Other lineage4.1.1.3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR7070144 Other lineage4.8 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003002 MDR-TB lineage2.2.1 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR18003038 Other lineage2.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR1791696 RR-TB La1.8.1 None
ERR4872102 MDR-TB lineage4.6.4 None