EBG00000313325 - n.1445delCinsTTT
Drug resistance types
0 Sensitive
12 RR-TB
43 HR-TB
48 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 22 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.1.2.1 | 10 |
| lineage4.6.4 | 2 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 4 |
| lineage2.2.1 | 24 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.4.2 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.8 | 6 |
| La1.8.1 | 1 |
| lineage2.2.2 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage3 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| La3 | 1 |
| lineage4.8.1 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 2 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5485522 | RR-TB | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | SRR3675482 | Other | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR6044841 | Other | lineage4.9 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR1791696 | Other | La1.8.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR6045986 | Other | lineage3 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR7070144 | Other | lineage4.8 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR6044815 | Other | lineage4.9 | None | SRR10321138 | Other | La3 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR3675243 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5485513 | RR-TB | lineage4.9 | None | SRR3675507 | Other | lineage4.9 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR11972311 | Other | lineage2.2.1;lineage4 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR8665994 | Other | lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | Other | lineage4.1.2.1 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675389 | Other | lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5979407 | Other | lineage3 | None | SRR3675582 | Other | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7070087 | Other | lineage4.8.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5485510 | RR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR7069946 | Other | lineage4.8 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4821053 | Other | lineage3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2;lineage4 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR5485511 | RR-TB | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None |
|---|
