EBG00000313339 - n.542G>A


Drug resistance types
21 Sensitive 14 RR-TB 9 HR-TB 13 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
lineage4.9 25
lineage4.3.4.2 2
lineage4.9;lineage1.1 1
lineage4.9;lineage4.1 1
lineage4.9;lineage4.3.4 1
lineage4.1.2 4
lineage4 8
lineage4.3.4.1 2
lineage4.1.2.1 10
lineage4.3.4 1
lineage4.3.3 4
lineage3 8
lineage4.1.1.2 1
lineage5.1.1 2
lineage4.3.2 1
lineage4.6.2.2 6
lineage4.6 1
lineage1.2.2.2 3
lineage4.6.1.2 3
lineage4.3.1.1 1
lineage1.1.1 2
lineage4.4.1.1.1 1
lineage4.4.1.1 2
lineage4.2.2.2 2
La1.4 1
lineage2.2.1 31
lineage4.2.2 2
lineage2.2 1
lineage2.2.2 3
lineage4.4.2 1
lineage4.8 12
4
lineage2.2.1.1 3
lineage1.1.3.2 1
lineage4.9;lineage3.1.1 1
lineage1.2.1.1 1
lineage3.1.3 2
lineage3.1 1
lineage1.2.2.1 1
lineage4.1.3 1
lineage3.1.1 1
lineage4.1.1.3 2
lineage4.4 1
lineage4.3.4.2.1 1
lineage4.1.1.3.1 2
lineage3.1.2 1
lineage3.1.2.2 1
lineage4.6.5 1
spoligotype Counts
spoligotype Count
None 168
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR10796571 Other lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796568 Other lineage4.9 None
ERR10796626 Other lineage4.1.2 None
ERR10796589 Other lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796598 RR-TB lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796629 Other lineage4 None
ERR10796631 Other lineage4.3.4 None
ERR10796634 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR10796632 Other lineage4.3.3 None
ERR6197034 Other lineage4.9 None
ERR10796635 Other lineage4 None
ERR4457901 Sensitive lineage4 None
ERR4797593 Sensitive lineage3 in
ERR5908131 Sensitive lineage4.1.1.2 None
ERR6197022 Other lineage4.9 None
ERR751330 MDR-TB lineage5.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR751338 Other lineage5.1.1 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117704 Other lineage4.6 None
ERR9117732 Other lineage1.2.2.2 None
SRR1049751 RR-TB lineage4.6.1.2 None
ERR9117812 Other lineage4.3.1.1 None
ERR9117823 Other lineage1.1.1 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR9117827 Other lineage1.2.2.2 None
SRR11972438 HR-TB lineage1.1.1 None
SRR11342683 Other lineage4.1.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR1140586 HR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002963 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR19303817 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303820 RR-TB lineage4.8 None
SRR19303917 Other lineage2.2.1 None
SRR19303819 Other lineage4.6.2.2 None
SRR19303899 Other lineage3 None
SRR19303907 Other lineage4.8 None
ERR176771 Sensitive None
SRR19304115 Other lineage4.1.2.1 None
SRR22048352 Sensitive lineage4.2.2.2 None
SRR19304104 Other lineage4.8 None
SRR21727760 Other lineage2.2.1 None
SRR22048536 Other lineage4.3.3 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR4815204 Other lineage2.2.1.1 gb
ERR176781 Sensitive lineage1.1.3.2 None
SRR3675265 Other lineage4 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675509 Other lineage4.9 None
ERR176718 Sensitive lineage2.2.1 None
ERR4815870 HR-TB lineage4.6.2.2 gb
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027220 Other lineage3.1.3 None
SRR3675513 Other lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027256 Other lineage4.1.2 None
ERR2027290 RR-TB lineage3.1 None
ERR2027277 Other lineage4.8 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4817926 HR-TB lineage4.6.2.2 gb
ERR245662 Sensitive lineage1.2.2.1 None
ERR4818296 Other lineage4.2.2 None
SRR5007204 Other lineage4.1.2.1 None
ERR4819770 Other lineage4.8 gb
ERR4820713 HR-TB lineage4.8 None
SRR6046087 Other None
ERR4822280 Other lineage4.1.3 None
SRR6046089 Other lineage4.1.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045553 RR-TB lineage4.9 None
SRR6045614 Other lineage4.8 None
SRR6045613 Other lineage3.1.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6044787 Other lineage4.4 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6046210 Other lineage4 None
SRR6045621 Other lineage4.1.1.3 None
SRR5818404 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045909 Other lineage4.8 None
SRR6044993 Other lineage3 None
SRR6045928 Other lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045102 Sensitive lineage4.6.2.2 gb
SRR6045952 HR-TB None
SRR6045986 Other lineage3 None
SRR6045365 Other lineage3 gb
SRR6046177 Other lineage3.1.2 None
SRR6045178 Other lineage3 None
SRR6045358 Sensitive lineage4.9 None
SRR6045376 HR-TB lineage4.1.2.1 gb
SRR6046456 Other lineage4.1.1.3.1 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046343 Other lineage2.2.1 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046482 HR-TB None
SRR6367397 Other lineage4.1.2.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046497 Other lineage4.9 None
SRR6046761 Other lineage3 gb
SRR6046848 Other lineage4.6.5 None
ERR502470 RR-TB lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502482 Sensitive lineage4.9 None
ERR502483 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502472 Other lineage4.6.2.2 None
ERR502489 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
SRR7131075 Other lineage4.8 None
ERR502497 Sensitive lineage4.9 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131121 Other lineage4.3.3 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None