EBG00000313339 - n.542G>A
Drug resistance types
5 Sensitive
10 RR-TB
1 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 16 |
| lineage4.1.2.1 | 2 |
| lineage4.8 | 8 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.4.2 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3 | 2 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 13 |
| lineage4.3.3 | 5 |
| lineage4.2.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.1.3 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.2.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183152 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR10796566 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10796615 | Other | lineage4.3.3;lineage4.9 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | ERR751338 | Other | lineage5.1.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR10796598 | Other | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR1049735 | Sensitive | lineage4.9 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR6046087 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR3675265 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR176718 | Sensitive | lineage2.2.1;lineage4 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR1180047 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None |
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