EBG00000313339 - n.542G>A


Drug resistance types
5 Sensitive 10 RR-TB 1 HR-TB 13 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 39 Other
lineage Counts
lineage Count
lineage4.9 16
lineage2.2.1 12
lineage4.1;lineage4.9 1
lineage4.4.1.1.1 1
lineage4.3.3 5
lineage4.1.1.1 1
lineage4.2.1 2
lineage3 2
lineage4.1.3 1
lineage4.8 8
lineage4.2.2.2 3
lineage3.1.1;lineage4.9 1
lineage4.4.1.1 2
lineage2.2.1.1 1
La1.4 1
lineage4.6.1.2 2
lineage1.2.1.1 1
lineage3.1.1 1
lineage4.4.2 2
lineage2.2.2 2
lineage4.1.2.1 2
lineage4.1.1.3 1
lineage4.3.4.2 2
lineage4 1
lineage3.1.3 1
lineage4.3.3;lineage4.9 1
lineage4.3.4.2;lineage4.9 1
lineage1.2.2.1 1
lineage5.1.1 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR502470 RR-TB lineage4.9 None
SRR18003045 Other lineage2.2.1 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR22048536 Other lineage4.3.3 None
SRR18002974 Other lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR867573 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR19304104 Other lineage4.8 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR11342688 Other lineage4.2.2.2 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR7131121 Other lineage4.3.3 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR19303907 Other lineage4.8 None
ERR867538 Other lineage4.2.2.2 None
ERR10796589 Other lineage4.9 None
SRR1180047 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR1183152 Other lineage4.9 None
SRR16278274 Other La1.4 None
ERR10796566 Other lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR176718 Sensitive lineage2.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR7070134 Other lineage3.1.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR11342669 Other lineage4.8 None
ERR10796626 Other lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR11342686 MDR-TB lineage4.8 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR18002963 Other lineage2.2.1 None
SRR3675582 Other lineage4.9 None
SRR6046087 Sensitive lineage4.9 None
ERR10796560 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR867571 Other lineage4.9 None
ERR10796635 Other lineage4.8 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR7131123 Other lineage4.8 None
SRR3675265 Other lineage4 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR10796571 Other lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18002981 Other lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR2027220 Sensitive lineage3.1.3 None
ERR867541 MDR-TB lineage4.2.1 None
ERR10796615 Other lineage4.3.3;lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR3675509 Other lineage4.9 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
ERR245662 Sensitive lineage1.2.2.1 None
ERR10796636 Other lineage4.1.2.1 None
SRR1049735 Sensitive lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
ERR751338 Other lineage5.1.1 None
ERR10796598 Other lineage4.9 None
SRR18003042 Other lineage2.2.1 None