lineage | Count |
---|---|
lineage4.3.2 | 1 |
lineage4 | 5 |
lineage4.8 | 15 |
lineage4.1.1.3 | 2 |
lineage3 | 3 |
lineage4.9 | 6 |
lineage4.1.2.1 | 1 |
lineage1.1.1 | 1 |
lineage4.1.1.3.1;lineage3.1.2 | 1 |
lineage4.7 | 1 |
lineage3.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.4.1.2 | 1 |
lineage2.2.1 | 7 |
lineage2.2.2 | 1 |
lineage4.9;lineage3.1.1 | 1 |
lineage3.1 | 1 |
lineage4.2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 50 |
ID | Drug resistance | Lineage | Country iso2 | SRR3732710 | Sensitive | lineage4.3.2 | None | ERR2229801 | Other | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228890 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR2515055 | Other | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4821288 | Other | lineage4.7 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR1194810 | Other | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | ERR736816 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR2027290 | RR-TB | lineage3.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4817047 | Other | lineage4.2.2.1 | gb | ERR4816464 | Other | lineage3 | None |
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