lineage | Count |
---|---|
lineage4.8 | 32 |
lineage4.1.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.2.2.1 | 1 |
lineage4.1.1.3 | 2 |
lineage4.9 | 2 |
lineage3 | 1 |
lineage4 | 1 |
lineage3.1.2;lineage4.1.1.3.1 | 1 |
lineage2.2.1 | 6 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.3.4.2 | 1 |
lineage1.1.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.3.3 | 2 |
lineage2.2.2 | 1 |
lineage4.8;lineage4.9 | 1 |
lineage3.1.2.1;lineage4.9 | 1 |
lineage4.4.1.1 | 2 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SAMEA3501063 | RR-TB | lineage4.8 | None |
ERR978750 | RR-TB | lineage4.8 | None |
SRR5007204 | Other | lineage4.1.2.1 | None |
ERR978755 | RR-TB | lineage4.8 | None |
ERR978761 | Other | lineage4.8 | None |
ERR2228910 | Other | lineage4.8 | None |
ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None |
SRR19303820 | RR-TB | lineage4.8 | None |
ERR978694_ERR978693 | Other | lineage4.8 | None |
ERR4817667 | HR-TB | lineage4.8 | None |
SAMEA3501015 | Other | lineage4.8 | None |
ERR978752 | Other | lineage4.8 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
SAMEA3501065 | RR-TB | lineage4.8 | None |
ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
ERR4817047 | Sensitive | lineage4.2.2.1 | gb |
ERR2512423 | Other | lineage4.1.1.3 | None |
ERR978760 | RR-TB | lineage4.8 | None |
ERR4814639 | HR-TB | lineage4.9 | None |
SRR5341267 | Pre-XDR-TB | lineage3 | None |
ERR4829333 | Other | lineage4 | None |
ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None |
SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None |
SRR18003049 | Other | lineage2.2.1 | None |
ERR2228900 | Other | lineage4.8 | None |
ERR978735 | Other | lineage4.8 | None |
ERR978726_ERR978727 | RR-TB | lineage4.8 | None |
ERR11252558 | Other | lineage4.6.3;lineage4.9 | None |
SRR18003023 | Other | lineage2.2.1 | None |
ERR978757 | RR-TB | lineage4.8 | None |
SRR11342673 | RR-TB | lineage4.3.4.2 | None |
ERR4819314 | Other | lineage1.1.1 | None |
SRR6397733 | Other | lineage4.4.1.2 | None |
ERR978733 | RR-TB | lineage4.8 | None |
ERR2513382 | RR-TB | lineage4.1.1.3 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
ERR978726 | RR-TB | lineage4.8 | None |
ERR978756 | Other | lineage4.8 | None |
SRR18002963 | Other | lineage2.2.1 | None |
ERR369161 | Sensitive | lineage4.9 | None |
ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None |
ERR978762 | Other | lineage4.8 | None |
SRR18002984 | MDR-TB | lineage2.2.2 | None |
ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
ERR978693 | Other | lineage4.8 | None |
ERR2228890 | Other | lineage4.8;lineage4.9 | None |
ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
SRR18003046 | MDR-TB | lineage2.2.1 | None |
SRR6397815 | Other | lineage4.4.1.1 | None |
SRR11342698 | RR-TB | lineage4.4.1.1 | None |
ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |
ERR978746 | RR-TB | lineage4.8 | None |
ERR978754 | RR-TB | lineage4.8 | None |
SAMEA3501070 | RR-TB | lineage4.8 | None |
SAMEA3501052 | RR-TB | lineage4.8 | None |
SAMEA3501046 | RR-TB | lineage4.8 | None |
SAMEA3501067 | RR-TB | lineage4.8 | None |
SRR18003024 | RR-TB | lineage2.2.1 | None |