EBG00000313339 - n.1052_1060delGTGGTGTAAinsATTAGGTGT
Drug resistance types
0 Sensitive
8 RR-TB
2 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 2 |
| lineage2.2.1 | 13 |
| lineage3.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage3 | 3 |
| lineage1.1.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.9 | 5 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.6 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303820 | RR-TB | lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2;lineage4 | None | ERR9117788 | Other | lineage3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR867544 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR867575 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR6046020 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR6044936 | Other | lineage4.6 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None |
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