EBG00000313325 - n.1244A>C
Drug resistance types
78 Sensitive
1 RR-TB
8 HR-TB
18 MDR-TB
18 Pre-XDR-TB
2 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 3 |
| lineage4.6.2.2 | 2 |
| lineage6.2.2 | 2 |
| lineage2.2.1 | 32 |
| lineage4.9 | 19 |
| La1.4 | 2 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 1 |
| lineage2.2.2 | 7 |
| lineage4.3.2.1 | 4 |
| lineage4.1.2.1 | 5 |
| lineage3.1.1 | 5 |
| lineage3 | 10 |
| lineage4 | 2 |
| lineage4.3.4.2 | 3 |
| lineage4.1.2 | 6 |
| lineage1.2.1.2 | 1 |
| La1.8.1 | 3 |
| La1.6 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| La1.7.1 | 2 |
| lineage4.3.4.1 | 5 |
| lineage4.2.1 | 4 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.3.3 | 3 |
| lineage1.1.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.8 | 3 |
| lineage1.1.3.2 | 2 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| La1.3 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17406750 | Other | lineage1.1.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | DRR184913 | Sensitive | lineage2.2.1 | None | SRR12199468 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR164021 | MDR-TB | lineage1.2.2.2;lineage4.3.4.2.1 | mw | ERR1873437 | HR-TB | lineage2.2.2 | None | ERR473278 | Sensitive | lineage4.9 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR212033 | Other | lineage4.9 | None | ERR779662 | Sensitive | lineage3.1.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR2179850 | Sensitive | lineage4 | None | ERR9786558 | Other | lineage4.3.4.2 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR3275190 | Other | lineage3 | nl | ERR5087606 | Other | La1.8.1 | None | SRR10993957 | Other | La1.6 | None | SRR16278273 | Other | La1.4 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4820193 | Other | lineage3 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR473304 | Sensitive | lineage2.2.1 | None | SRR3725588 | Sensitive | lineage4.9 | None | SRR3725596 | Sensitive | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR161125 | Sensitive | lineage4 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR3725585 | Sensitive | lineage4.9 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | ERR5758436 | Other | lineage2.2.2 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | SRR6824550 | Sensitive | lineage4.5 | None | ERR3283051 | Other | lineage4.9 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR26112012 | Sensitive | lineage4.2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6045957 | Other | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR7240147 | Other | La1.8.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR323048 | Sensitive | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR4817102 | Sensitive | lineage1.1.2;lineage4 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR5341430 | Other | lineage3 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | SRR7240148 | Other | La1.8.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR987719 | HR-TB | lineage3 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR3725590 | Sensitive | lineage4.9 | None | SRR6484983 | Sensitive | lineage4.2.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SRR5341460 | Other | lineage3 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR6789621 | Other | lineage4.9 | None | ERR181905 | Sensitive | lineage2.2.1 | mw | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | SRR11871413 | XDR-TB | lineage2.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | SRR22175227 | HR-TB | lineage3 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR11465688 | Sensitive | lineage4.3.4.1 | None | ERR9786663 | Other | lineage4.3.4.2 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | ERR4769462 | Other | La1.3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None |
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