EBG00000313325 - n.1244A>C
Drug resistance types
101 Sensitive
6 RR-TB
15 HR-TB
20 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| 7 | |
| lineage3 | 18 |
| lineage3.1.1 | 7 |
| lineage4.9.1 | 2 |
| lineage4.9 | 24 |
| lineage4.1.2.1 | 11 |
| lineage3.1.2.1 | 4 |
| lineage1.1.3.2 | 5 |
| lineage4.3.4.1 | 6 |
| lineage4.3.4.2.1 | 11 |
| lineage4.1.1.3 | 5 |
| lineage4.4.1.1 | 6 |
| lineage4.2 | 1 |
| lineage4.2.1 | 3 |
| lineage1.1.2 | 5 |
| lineage2.2.1 | 31 |
| lineage6.3.1 | 1 |
| lineage4.6.2.2 | 5 |
| lineage4.8 | 4 |
| lineage4.1.2 | 8 |
| lineage1.1.3.1 | 2 |
| lineage4.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.6.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1.1 | 5 |
| lineage5.1.1 | 2 |
| lineage2.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.4.2 | 3 |
| lineage4.1.1 | 2 |
| lineage4.4.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
| La1.8.1 | 4 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.3.3 | 6 |
| lineage6.2.2 | 2 |
| La1.3 | 2 |
| La1.2 | 2 |
| lineage2.2.2 | 4 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage3.1.3 | 1 |
| lineage6.1.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| La1.6 | 2 |
| lineage1.1.3 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| La1.7.1 | 3 |
| La1.4 | 2 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.2.1;lineage1.2.2.2 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 239 |
Geographic prevalence
Country level data for this variant is available for 21 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816231 | Other | lineage4 | None | ERR212033 | HR-TB | None | ERR2446509 | Other | lineage3 | nl | ERR212042 | HR-TB | lineage3.1.1 | None | ERR4817102 | Sensitive | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR216902 | Sensitive | lineage1.1.3.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR2513398 | Other | lineage4.2.1 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2515055 | Other | lineage3 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4819125 | Other | lineage2.2.1 | gb | ERR4818440 | Other | lineage6.3.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR5341460 | Other | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819310 | Sensitive | lineage4.1.2.1 | gb | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5341430 | Other | lineage3 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821775 | Other | lineage4 | None | ERR4821054 | Other | lineage3 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR4820193 | Other | lineage3 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | SRR6045572 | Sensitive | lineage4.6.3 | gb | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6044837 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR6045957 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046729 | Other | None | ERR4828391 | Sensitive | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6484983 | Sensitive | lineage4.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6981912 | Sensitive | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982070 | RR-TB | None | ERR3275190 | Other | lineage3 | nl | ERR5087606 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR4178135 | Sensitive | lineage4.3.4.1 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR4769462 | Other | La1.3 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769418 | Other | La1.2 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR4769561 | Other | La1.3 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR6362476 | MDR-TB | lineage2.2.1 | None | ERR6865839 | Sensitive | lineage4.3.4.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR7821222 | Sensitive | lineage4.8.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR987719 | HR-TB | lineage3 | None | ERR9786663 | Sensitive | lineage4.3.4.2 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR10993953 | Other | La1.6 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR11294512 | Other | La1.8.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871413 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199726 | Other | La1.2 | None | SRR13199738 | Other | La1.7.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR16278273 | Other | La1.4 | None | SRR16278274 | Other | La1.4 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1792247 | Other | La1.7.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4815640 | Other | lineage3 | gb | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161033 | HR-TB | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR163988 | Sensitive | lineage4.1.2 | None | ERR164021 | MDR-TB | lineage4.3.4.2.1;lineage1.2.2.2 | mw | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR176670 | Sensitive | lineage3.1.1 | mw | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR211997 | Sensitive | lineage3.1.1 | mw | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4816001 | Other | lineage3 | None | ERR4816103 | Sensitive | lineage3 | gb | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR181905 | Sensitive | lineage2.2.1 | mw | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR2027256 | Other | lineage4.1.2 | None |
|---|
