Rv0667 - c.2220G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
43 Sensitive
20 RR-TB
12 HR-TB
11 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 57 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3 | 7 |
| La1.3 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 11 |
| lineage2.2.2 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage5.1.1 | 1 |
| La1.6 | 1 |
| lineage4.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| 1 | |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La2 | 1 |
| lineage4 | 1 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797065 | RR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4769514 | Other | La1.3 | None | ERR4818536 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1140716 | Other | lineage3 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4821773 | Other | La1.6 | None | ERR4820030 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4769552 | Sensitive | La1.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4798823 | HR-TB | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None |
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