lineage | Count |
---|---|
lineage4.9 | 16 |
La1.8.1 | 2 |
La1.7.X-unk4 | 1 |
lineage2.2.1 | 13 |
lineage4.3.2.1 | 1 |
lineage4.2.1 | 1 |
3 | |
lineage4.3.3 | 1 |
lineage4.4 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.2 | 1 |
lineage3 | 5 |
lineage4 | 4 |
lineage4.3 | 1 |
lineage4.9;lineage3 | 1 |
lineage4.1.1.3.1 | 2 |
lineage4.3.4.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.7 | 1 |
lineage5.1.1 | 1 |
lineage4.8 | 1 |
lineage4.1.1.3 | 1 |
lineage4.4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769530 | RR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1173310 | MDR-TB | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4815868 | RR-TB | lineage4 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4817069 | RR-TB | None | ERR4817433 | Sensitive | lineage4.9;lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6789628 | HR-TB | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None |
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