lineage | Count |
---|---|
lineage4.2.2.2 | 1 |
lineage2.2;lineage4 | 1 |
lineage4.9 | 11 |
lineage2.2.2 | 2 |
lineage4.4 | 1 |
lineage4.2.1 | 2 |
lineage4.4.1.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.1.1.3.1 | 2 |
lineage2.2.1;lineage4.9 | 1 |
lineage2.2.1 | 8 |
lineage4.3.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.1.1.1 | 1 |
La1.7.X-unk4 | 1 |
lineage4.3.3 | 1 |
1 | |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1180446 | Other | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR4817069 | RR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None |
---|