lineage | Count |
---|---|
lineage3.1.2.1 | 1 |
lineage4.9 | 38 |
lineage4.3.3 | 3 |
lineage3 | 3 |
lineage4.3.4.2.1 | 1 |
6 | |
lineage2.2.1 | 6 |
lineage2.2.1.1 | 1 |
lineage4 | 7 |
lineage4.8.1 | 1 |
La1.3 | 3 |
lineage4.8 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage1.2.1.2.1 | 1 |
La1.4 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815022 | Other | lineage3.1.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR3275190 | Other | lineage3 | nl | SRR6046385 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4024991 | Other | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR3283021 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736856 | HR-TB | lineage4 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR12199473 | Sensitive | lineage1.2.1.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None |
---|