EBG00000313325 - n.837_842delTTGGGAinsACGTTT
Drug resistance types
0 Sensitive
5 RR-TB
4 HR-TB
18 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 34 |
| lineage3 | 2 |
| lineage4.4.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.4 | 1 |
| lineage2.2.2 | 2 |
| La1.8.1 | 2 |
| lineage4.5 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.9 | 11 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.3 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 4 |
| lineage4.2.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513405 | Other | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR5311077 | Other | La1.8.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR10796592 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR6044952 | Other | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7070293 | Other | lineage4.8 | None | ERR3468613 | Other | La1.8.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7645928 | Other | lineage4.7 | None | ERR10796560 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None |
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