Rv1630 - c.549G>T
Drug resistance types
0 Sensitive
22 RR-TB
2 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8 | 30 |
| lineage3 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.8;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| La1.8.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4815816 | Other | lineage4.5 | gb |
| SRR11342698 | RR-TB | lineage4.4.1.1 | None |
| SAMEA3501070 | RR-TB | lineage4.8 | None |
| SAMEA3501052 | RR-TB | lineage4.8 | None |
| SAMEA3501067 | RR-TB | lineage4.8 | None |
| SRR1173281 | Other | lineage3 | None |
| ERR017781 | Other | lineage3 | None |
| ERR978750 | RR-TB | lineage4.8 | None |
| ERR2228910 | Other | lineage4.8 | None |
| ERR978761 | Other | lineage4.8 | None |
| ERR2513382 | RR-TB | lineage4.1.1.3 | None |
| ERR978756 | Other | lineage4.8 | None |
| SAMEA3501015 | Other | lineage4.8 | None |
| ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None |
| ERR978693 | Other | lineage4.8 | None |
| ERR2228890 | Other | lineage4.8;lineage4.9 | None |
| ERR2512423 | Other | lineage4.1.1.3 | None |
| ERR2228900 | Other | lineage4.8 | None |
| SRR1173740 | Other | lineage3;lineage4 | None |
| ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |
| ERR978751 | Other | lineage4.8 | None |
| SAMEA3501063 | RR-TB | lineage4.8 | None |
| SRR5007204 | Other | lineage4.1.2.1 | None |
| ERR978733 | RR-TB | lineage4.8 | None |
| ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None |
| SRR11342649 | MDR-TB | lineage4.3.3 | None |
| SRR16156775 | Other | lineage4.9 | None |
| ERR978762 | Other | lineage4.8 | None |
| SAMEA3501065 | RR-TB | lineage4.8 | None |
| ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
| ERR978760 | RR-TB | lineage4.8 | None |
| SRR6397815 | Other | lineage4.4.1.1 | None |
| ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None |
| ERR5311077 | Other | La1.8.1 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR978746 | RR-TB | lineage4.8 | None |
| ERR978735 | Other | lineage4.8 | None |
| ERR978726_ERR978727 | RR-TB | lineage4.8 | None |
| ERR978754 | RR-TB | lineage4.8 | None |
| SAMEA3501046 | RR-TB | lineage4.8 | None |
| ERR978757 | RR-TB | lineage4.8 | None |
| SRR11342673 | RR-TB | lineage4.3.4.2 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR978694_ERR978693 | Other | lineage4.8 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| ERR978726 | RR-TB | lineage4.8 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR978752 | Other | lineage4.8 | None |
| ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
