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SRA data
Rv1630
- c.549G>T
Drug resistance types
0 Sensitive
22 RR-TB
2 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.8
30
lineage3
2
lineage4.1.1.3
2
lineage4.4.1.1
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage3;lineage4
1
lineage4.1.2.1
1
lineage4.3.3
1
lineage4.8;lineage4.9
1
lineage3.1.2;lineage4.1.1.3.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
48
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR017781
Other
lineage3
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2228890
Other
lineage4.8;lineage4.9
None
ERR2228900
Other
lineage4.8
None
ERR2228910
Other
lineage4.8
None
ERR2512423
Other
lineage4.1.1.3
None
ERR2513382
RR-TB
lineage4.1.1.3
None
Showing 1 to 10 of 48 entries
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