EBG00000313325 - n.453_461delGTCCGGGTT
Drug resistance types
2 Sensitive
2 RR-TB
3 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage3 | 8 |
| 1 | |
| lineage1.2.1.2.1 | 1 |
| lineage4.8 | 3 |
| lineage6 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9 | 8 |
| lineage4.9;La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR9787033 | Sensitive | lineage6 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2446509 | Other | lineage3 | nl | ERR4816868 | Other | lineage4.4.1.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5818394 | Other | lineage4.9 | None | ERR2512986 | Other | lineage3 | None | ERR4818831 | Other | lineage3 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5818464 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5908124 | Other | lineage4.8 | None |
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