EBG00000313325 - n.1302G>T


Drug resistance types
18 Sensitive 26 RR-TB 17 HR-TB 25 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 138 Other
lineage Counts
lineage Count
lineage4.9 42
lineage2.2.1 34
lineage1.2.1.2.1 2
La1.4 1
La1.8.1 4
lineage3.1.2 5
lineage4.9.1 1
lineage4.5 3
lineage2.2.1.1 2
lineage4.3.3 12
lineage3 18
lineage1.1.3 1
lineage2.2.2 5
lineage4.1.1.3 2
lineage4.6.2.2 1
lineage4 7
lineage3.1.1 1
lineage1.1.3.1 1
lineage4.8 9
lineage4.2.1 3
lineage1.1.2 5
lineage4.3.4.1 3
lineage4.1.3 3
lineage4.1.2 5
lineage4.1.2.1 14
lineage4.6.3 1
7
lineage1.1.1 3
lineage4.3.4.2 3
lineage4.3 1
lineage4.2.2.1 1
lineage4;lineage3.1.2.1 1
lineage4.1.4 3
lineage1.1.3.2 3
lineage4.3.2.1 2
lineage4;lineage3 1
lineage4.1.1.3.1 1
lineage4.2 1
lineage4.1.1.2 1
lineage2.2 3
lineage4;lineage2.2.1 1
lineage4.1.1 1
lineage4.6.1.1 2
lineage4.2.1.1 1
La1.8.2 1
La1.3 1
lineage1.1.3.3 1
lineage1.1.1.1 1
La1.2 1
lineage4.6.1.2 1
lineage4.9;lineage2.2 2
lineage4.3.4.2.1 4
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.9;lineage2.2.1 2
La1.6 1
lineage4.3.4 1
La1.7.1 2
lineage1.2.2.2 1
lineage3.1.2.1 1
lineage4.9;lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 243
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13861727 Other lineage4.9 None
SRR13861519 Other lineage4.9 None
SRR14801294 MDR-TB lineage2.2.1 None
SRR19304114 Other lineage1.2.1.2.1 None
SRR16278292 Other La1.4 None
SRR1791899 HR-TB La1.8.1 None
SRR1792140 Other La1.8.1 None
SRR18213800 Other lineage3.1.2 None
SRR18911000 Sensitive lineage2.2.1 None
SRR2101691 Other lineage2.2.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101643 Other lineage2.2.1 None
SRR19612366 Other lineage4.5 None
SRR2101684 Other lineage2.2.1.1 None
SRR21676318 Sensitive lineage2.2.1 None
SRR21675949 Other lineage4.3.3 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
SRR21728339 Other lineage3 None
SRR21685367 MDR-TB lineage2.2.1 None
SRR21711124 Other lineage1.1.3 None
ERR8025556 Pre-XDR-TB lineage2.2.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR3675460 Sensitive lineage4.1.1.3 None
ERR4815336 Other lineage4.6.2.2 None
ERR4815197 Other lineage4 None
ERR4815334 Other lineage3.1.1 None
ERR4815452 Other lineage4.3.3 None
SAMN02419540 Other lineage2.2.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR4814790 Other lineage4.2.1 None
ERR4815956 Other lineage1.1.2 None
ERR4814912 HR-TB lineage4.3.4.1 None
ERR4815556 RR-TB lineage3 None
ERR4815832 Other lineage3 None
ERR4815886 Sensitive lineage4.9 None
ERR4817479 Other lineage4.1.3 None
ERR2027256 Other lineage4.1.2 None
ERR4816177 Other lineage4.1.2.1 None
ERR4817368 Other lineage4.6.3 None
ERR4817478 Other lineage3 None
ERR4816266 Other lineage3 None
ERR4816198 Sensitive lineage4.1.3 None
ERR2228859 RR-TB lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229358 Other lineage4.8 None
ERR4816833 Other lineage4.1.1.3 None
ERR2228822 Other lineage4.9 None
ERR4817069 RR-TB None
ERR4816429 Other lineage1.1.2 None
ERR2229780 Other lineage4.9 None
ERR4816729 Sensitive lineage4.9 None
ERR4816883 Other lineage4.5 None
ERR2228873 Other lineage4.8 None
ERR4817310 Other lineage4.9 None
ERR2228888 Other lineage4.8 None
ERR4818188 Other lineage4.1.2.1 None
ERR4817703 Other lineage1.1.1 None
ERR4819012 Other lineage1.1.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4817917 Other lineage2.2.1 None
ERR4817958 Other lineage4.2.1 None
ERR4818008 Other lineage4.3.3 None
SAMN02585982 MDR-TB lineage4.3.3 None
ERR4818449 Other lineage4.3.3 None
ERR4819073 Other lineage4.1.2.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR4818904 Other lineage4.8 None
ERR4818471 Other lineage2.2.1 None
ERR4817547 Other lineage4.2.2.1 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR4819087 Other lineage4.3.3 None
ERR4819206 Other lineage4.8 None
ERR4820209 HR-TB lineage4.1.2 None
SRR5341375 Other lineage4.9 None
ERR4820247 HR-TB lineage4.9 None
SRR5341396 Other lineage4 None
SRR5341390 HR-TB lineage1.1.2 None
SRR5341417 Pre-XDR-TB lineage3 None
ERR4819377 Other lineage4;lineage3.1.2.1 None
ERR4820335 Other lineage4.1.2.1 None
ERR4819383 RR-TB lineage4.9 None
SRR5341423 Other lineage1.1.2 None
ERR4820020 Sensitive lineage2.2.1 None
ERR4819683 Other lineage4.1.4 None
ERR4819863 RR-TB lineage4.9 None
ERR4819553 Other lineage4.1.4 None
ERR4819679 Other lineage3 None
ERR4820503 Other lineage2.2.1 None
SRR5341312 Pre-XDR-TB lineage2.2.1 None
ERR4820060 Other lineage4.3.3 None
ERR4820030 Other lineage4.9 None
ERR4820107 RR-TB None
ERR2660524 HR-TB lineage1.1.3.2 None
SRR6046096 Other lineage4.1.2.1 None
ERR4821172 RR-TB lineage4.9 None
ERR2747678 Other La1.8.1 None
ERR4821927 HR-TB lineage4.3.4.1 None
ERR4822066 HR-TB lineage4.1.2.1 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821368 Other lineage1.1.1 None
SRR6045045 Other lineage2.2.1 None
ERR4821530 HR-TB lineage4.3.4.1 None
ERR4822280 Other lineage4.1.3 None
SRR6045683 Other lineage3.1.2 None
SRR6045726 Other lineage3 None
SRR6045744 Other lineage3.1.2 None
SRR6045036 Other lineage4;lineage3 None
ERR4821740 Sensitive lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045925 Other lineage4.2 None
SRR6044952 RR-TB lineage4.9 None
SRR6046015 Other lineage4.9 None
SRR6045992 Other lineage3 None
SRR6046607 Other lineage3 None
SRR6046208 Other lineage4 None
SRR6046246 Other lineage3 None
SRR6046273 Other lineage3.1.2 None
ERR2851354 RR-TB lineage4.9 None
ERR2851371 Other lineage4.9 None
SRR6153036 Other None
SRR6389899 Other lineage4.1.2 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR6856094 Other lineage2.2.1 None
SRR6982088 Other lineage4.1.1.2 None
SRR6982140 Other lineage2.2 None
SRR6982494 Other lineage2.2.2 None
SRR6982194 Other lineage2.2.1 None
SRR6982275 Other lineage2.2.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6981966 Other lineage2.2.1 None
SRR6982371 Sensitive lineage4.1.1 None
SRR7645936 Sensitive lineage2.2.1 None
SRR7131169 Other lineage4.1.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7645827 Other lineage4.2.1.1 None
SRR7645900 Sensitive lineage4.8 None
DRR184629 Other lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
SRR7851307 Other La1.8.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR7755643 Pre-XDR-TB lineage4.2.1 None
DRR184932 Other lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR024351 MDR-TB lineage2.2.1 None
ERR144568 Pre-XDR-TB None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR036215 Other lineage4.8 None
ERR1023527 RR-TB lineage4 None
ERR1034722 Other lineage4.9 None
ERR1144990 Other lineage4.8 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324375 Other lineage1.1.3.2 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3439454 Other La1.8.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR3806453 Other lineage4.3.4.2 None
ERR4769429 Other lineage4.9 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR473337 Other lineage4.1.2 None
ERR4769424 Sensitive lineage4.9 None
ERR4769462 Other La1.3 None
ERR5865343 MDR-TB lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR5863929 Pre-XDR-TB lineage2.2.1 None
ERR5865302 Pre-XDR-TB lineage2.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR5908229 Sensitive lineage4.3.3 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR6201802 Other La1.2 None
ERR751865 Other lineage1.1.1 None
ERR6362858 Pre-XDR-TB lineage2.2.2 None
ERR773806 Sensitive lineage2.2.1 None
ERR7821182 Other lineage1.1.3.2 None
ERR9117681 Other lineage4.3.3 None
ERR9117714 Other lineage3.1.2 None
SRR1013528 Pre-XDR-TB lineage2.2 None
ERR987704 HR-TB lineage4.6.1.2 None
ERR987733 RR-TB lineage4.6.1.1 None
SRR1013527 RR-TB lineage2.2 None
ERR9117728 Other lineage3 None
ERR9786844 Other lineage4.3.4.2 None
SRR1019127 Other lineage4.9;lineage2.2 None
SRR1013531 MDR-TB lineage4.9 None
SRR1049672 Other lineage3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062865 HR-TB lineage2.2.2 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR10869241 Pre-XDR-TB lineage2.2.1 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR10993951 RR-TB La1.6 None
SRR1106670 Other lineage4.9 None
SRR11342683 Other lineage4.1.2 None
SRR1140942 Other None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1141261 MDR-TB lineage4.9 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR1159158 Other lineage2.2.1 None
SRR1162501 Other lineage2.2.1 None
SRR1172808 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR1173025 Other lineage4.9 None
SRR1173074 Other lineage4.9 None
SRR1173113 RR-TB lineage4.3.4 None
SRR1173740 Other None
SRR1173770 Other lineage4.9 None
SRR1175304 MDR-TB lineage4.3.3 None
SRR1180252 Other lineage4.9 None
SRR1180982 Other lineage2.2.1 None
SRR1181161 Other lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173521 HR-TB lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1183958 Other lineage2.2.1 None
SRR1196582 Other lineage4.9 None
SRR1184379 Other lineage4 None
SRR1184383 Other lineage4.9 None
SRR1196557 HR-TB lineage4.9;lineage2.2 None
SRR13199738 Other La1.7.1 None
SRR11972394 Pre-XDR-TB lineage2.2.1.1 None
SRR12882037 Sensitive lineage1.2.2.2 None
SRR12882631 Other lineage3.1.2.1 None
SRR11972420 MDR-TB lineage2.2.1 None
SRR13199746 Other La1.7.1 None
SRR13591410 Other lineage4.9;lineage4.3.4.1 None