EBG00000313339 - n.1519G>A
Drug resistance types
4 Sensitive
11 RR-TB
2 HR-TB
6 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 5 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3 | 10 |
| La1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.9 | 21 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 1 |
| 3 | |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.8 | 3 |
| lineage1.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 66 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR019855 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | ERR4769436 | Other | La1.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4798245 | Sensitive | lineage1.1.2 | in | ERR4798769 | Other | lineage1.1.3.3 | None | ERR6197024 | RR-TB | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140736 | RR-TB | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR18391684 | Other | La1.7.1 | es | SRR22048374 | Sensitive | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR4033442 | Sensitive | lineage4.3.2.1 | za | SRR8692807 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR2228965 | Other | lineage4.8 | None | ERR4816417 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820030 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045379 | Other | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046246 | Other | lineage3 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None |
|---|
