EBG00000313339 - n.2862C>T
Drug resistance types
4 Sensitive
12 RR-TB
1 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 5 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 5 |
| lineage4.9 | 9 |
| 1 | |
| lineage4.3.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage2.2.2 | 5 |
| lineage2.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR4817069 | RR-TB | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR27450655 | Sensitive | lineage2.2.2 | None | DRR184629 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR26399706 | Sensitive | lineage2.2.2 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1140716 | Other | lineage3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR27450656 | Other | lineage2.2.2 | None | ERR4830218 | Sensitive | lineage2.2.2 | vn | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1062918 | Other | lineage3 | None | SRR6044952 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | ERR9119214 | Sensitive | lineage2.2.2 | None | ERR3275941 | RR-TB | lineage4.3 | nl |
|---|
