EBG00000313339 - n.595T>A
Drug resistance types
74 Sensitive
23 RR-TB
26 HR-TB
21 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
188 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2 | 2 |
| lineage1.1.3.2 | 2 |
| lineage2.2.1 | 36 |
| 15 | |
| lineage4.9 | 51 |
| lineage4.1.2.1 | 21 |
| lineage4.8 | 31 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.3 | 11 |
| lineage1.1.3.1 | 4 |
| lineage1.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.1.1 | 6 |
| lineage4.1.1 | 6 |
| lineage3.1.1 | 9 |
| lineage4.4.1.1 | 5 |
| La1.8.2 | 1 |
| lineage4.1.3 | 1 |
| lineage3 | 20 |
| lineage4.6.1 | 2 |
| lineage4.6.3 | 1 |
| lineage1.1.2 | 5 |
| lineage3.1.2.1 | 1 |
| lineage4 | 8 |
| lineage4.2.2 | 3 |
| lineage4.1.1.3.1 | 4 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 3 |
| lineage1.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.6 | 2 |
| lineage4.7 | 5 |
| lineage4.3.4.2 | 6 |
| lineage4.9.1 | 1 |
| lineage4;lineage3 | 2 |
| lineage4.3.4.1 | 5 |
| lineage1.1.3 | 2 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.1.4 | 3 |
| lineage4.3.2 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2 | 3 |
| lineage4.1.1.3 | 3 |
| lineage4.3.2.1 | 7 |
| La1.6 | 1 |
| lineage3.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.8.2 | 2 |
| lineage4.4 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| La1.8.1 | 6 |
| lineage2.2.1.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage2.2.2 | 2 |
| lineage6.3.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage1.2.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 341 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR176771 | Sensitive | None | ERR176780 | Sensitive | lineage4.9 | None | ERR4814329 | Other | lineage4.1.2.1 | None | ERR4815618 | Other | lineage4.8 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR4814362 | Other | lineage4.8 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR4815777 | Other | lineage4.9 | None | ERR4814572 | Other | lineage4.3.3 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR4814815 | Other | lineage4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR4815551 | Other | lineage2.2.1 | None | ERR4814932 | Other | lineage4.1.1 | None | ERR176740 | HR-TB | None | ERR4815909 | Other | lineage4.8 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4816969 | Other | lineage4.8 | None | ERR4815919 | Other | lineage4.8 | None | ERR4817008 | Other | lineage4.1.2.1 | None | ERR2229554 | Other | lineage4.8 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4817479 | Other | lineage4.1.3 | None | ERR4817046 | Other | lineage3 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR1199021 | Other | lineage4.6.1.1 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4816657 | Other | lineage3.1.2.1 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | ERR4816696 | Other | lineage3 | None | ERR2179850 | Sensitive | lineage4 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4817275 | Other | lineage4.2.2 | None | ERR4816876 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2228822 | Other | lineage4.9 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4816883 | Other | lineage4.5 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228874 | Other | lineage4 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818663 | Other | lineage3 | None | ERR4816882 | Other | lineage4.8 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4817822 | Other | lineage4.6 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817987 | Other | lineage4.7 | None | ERR4819012 | Other | lineage1.1.2 | None | ERR4818008 | Other | lineage4.3.3 | None | ERR2510794 | Other | lineage4.3.4.2 | None | ERR2510820 | Other | lineage4.8 | None | ERR4818116 | Other | lineage4.3.4.2 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR1199009 | Sensitive | lineage4.6.1.1 | None | ERR4818384 | Other | lineage4.8 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR245790 | Sensitive | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR4818261 | Other | lineage1.1.2 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2509885 | RR-TB | lineage3 | None | ERR4818565 | Other | lineage4.8 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818580 | Other | lineage4.7 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4819131 | Other | lineage4 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR2512832 | Other | lineage4.3.4.1 | None | SRR5007174 | Other | lineage4.3.4.1 | None | ERR4817551 | Other | lineage4.9 | None | ERR4818637 | Other | lineage4.8 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820717 | Other | lineage1.1.3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4820332 | Other | lineage2.2.1 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819513 | Other | lineage4.3.2 | None | ERR2514261 | Other | lineage3 | None | ERR4820761 | Other | lineage4.3.4.2 | None | ERR4820397 | Other | lineage4.9 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4820416 | Other | lineage4.1.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | SRR5341430 | Other | lineage3 | None | ERR4819679 | Other | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819703 | Sensitive | lineage4.9 | None | ERR4820801 | Other | lineage1.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819723 | Other | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820918 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR2514968 | Other | lineage4.3.3 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR4820967 | HR-TB | None | SRR6045464 | Other | lineage4.1.1.3 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4821722 | Other | lineage2.2.1 | None | ERR4821880 | HR-TB | lineage1.1.2 | None | ERR4822104 | RR-TB | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR4821773 | Other | La1.6 | None | SRR5818404 | Other | lineage4.9 | None | SRR6045894 | Other | lineage4.8 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045778 | Other | lineage3.1 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045110 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045289 | Other | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6045379 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | ERR4829359 | Other | lineage4.7 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046710 | Other | lineage4.8.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046824 | HR-TB | None | SRR6046839 | Other | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR3148546 | Other | lineage4.3.2 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6046874 | Other | lineage4.5 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6982196 | Sensitive | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6797423 | Sensitive | lineage1.1.3.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | ERR4815837 | Other | lineage4.1.4 | gb | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131096 | Other | lineage4.8 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR7535080 | HR-TB | lineage4.8 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR036194 | Other | lineage4.6.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR036198 | Other | lineage4.3.4.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR11465291 | Sensitive | None | ERR1023527 | RR-TB | lineage4 | None | ERR10796630 | HR-TB | None | ERR3261351 | Other | lineage4.9 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR4132447 | HR-TB | lineage4 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4596929 | MDR-TB | lineage4.2.2.2;lineage3 | None | ERR4627379 | Other | La1.8.1 | None | ERR4769472 | Other | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR2513837 | Sensitive | lineage4.1.2.1 | gb | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5336160 | Other | lineage6.3.2 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117730 | Other | lineage1.1.2 | None | ERR037513 | Sensitive | lineage4.3.4.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR176718 | Sensitive | lineage2.2.1 | None | ERR9117679 | Sensitive | lineage2.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117759 | Other | lineage3 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1011488 | Other | lineage2.2.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1140942 | Other | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1173740 | Other | None | SRR1173025 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972434 | Sensitive | lineage2.2.1 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR124451 | HR-TB | None | SRR12199486 | Other | lineage2.2.1 | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR18213675 | Other | lineage4.8 | None | SRR1791940 | Other | La1.8.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
