EBG00000313339 - n.41G>A


Drug resistance types
52 Sensitive 5 RR-TB 29 HR-TB 11 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 28 Other
lineage Counts
lineage Count
lineage4.9 65
lineage4.1.2.1;lineage4.4.1 1
lineage4 2
lineage4.6.1.1 2
lineage2.2.1 11
lineage4.1.2.1 3
lineage2.2 1
M.canetti;lineage4.9;lineage9 1
lineage4.3.3 4
lineage2;lineage4.9 1
lineage4.8 3
lineage2.1;lineage4.9 1
lineage4.3.2.1 2
lineage4.1.3 1
lineage1.2.2.2 1
lineage3.1.1;lineage4.9 1
lineage4.4.1.1 1
lineage4.2.1 2
La1.7;lineage4.9 4
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.7 1
lineage4.4.1.1.1 2
lineage4.3.4.2.1 2
lineage4.1.1.3 2
lineage2.2.1;lineage4.9 2
La3;lineage4.3.4 1
lineage4.3.4.2 1
lineage4.1.1.3;lineage4.9 2
lineage1.1.1 1
La3;lineage4.9 1
lineage2.2.1;lineage4 1
La1.2;La1.8.1 1
lineage2.2.2 1
M.canetti;lineage1 1
lineage3 1
lineage3;lineage4 1
spoligotype Counts
spoligotype Count
None 129
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180355 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4798823 HR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR7645906 Other lineage2.2.1 None
SRR6045359 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1172807 Sensitive lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR11342669 Other lineage4.8 None
SRR7645899 Other lineage2.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR176741 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR212123 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1173515 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4819933 Sensitive lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1180319 Sensitive lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR21677886 Sensitive lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR867570 RR-TB lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
SRR1175513 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR7645928 Other lineage4.7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR6359069 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1196545 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046141 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4816762 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1180345 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4817667 HR-TB lineage4.8 None
SRR1173385 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR1175487 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR161037 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR15014655 Other M.canetti;lineage1 None
ERR6359074 HR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR1173740 Other lineage3;lineage4 None
SRR1175512 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None