EBG00000313339 - n.41G>A


Drug resistance types
51 Sensitive 12 RR-TB 33 HR-TB 11 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 57 Other
lineage Counts
lineage Count
lineage2.2.1 8
lineage4.9 75
lineage4.8 9
lineage4.1.2.1 7
lineage4 19
lineage4.2.1 4
lineage3.1.3 1
lineage4.2.2.2 1
lineage1.1.2 2
lineage3 4
lineage3.1.1 1
11
lineage4.1.1.3 1
lineage4.7 1
lineage4.6.1.1 2
La1.3 4
lineage2.2 2
lineage4.6 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.4.1.1.1 2
La1.8.1 1
La1.6 1
lineage4.3.4.2.1 1
lineage4.9;lineage2.2 1
lineage2 1
La2 1
lineage4.2.2.1 1
lineage4.3.4 1
lineage4.9;lineage3.1.1 1
lineage4.1.3 1
lineage4;lineage2 1
lineage4.3.3 1
lineage4.1.2 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 170
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR2024953 MDR-TB lineage2.2.1 cn
ERR4819933 Other lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR4821811 RR-TB lineage4.9 None
SRR6045894 Other lineage4.8 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR6046210 Other lineage4 None
SRR6045664 Other lineage4.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6045613 Other lineage3.1.3 None
SRR6046141 Other lineage4.9 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044876 Sensitive lineage4 None
SRR6044769 Other lineage1.1.2 None
SRR6045909 Other lineage4.8 None
SRR6046442 Other lineage3 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR6045191 Sensitive lineage4.9 None
SRR6044993 Other lineage3 None
SRR6045359 Sensitive lineage4.9 None
SRR6046385 Other lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR6046497 Other lineage4.9 None
SRR6046739 Other lineage1.1.2 None
ERR323037 HR-TB lineage4 None
SRR7496471 Sensitive None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6855695 Sensitive lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR8217918 HR-TB None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645971 Other lineage2.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7755657 Other lineage4.8 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755655 Other lineage4.1.2.1 None
ERR473303 Sensitive lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR067712 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR10796597 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR037234 Sensitive lineage4.9 None
ERR3283025 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3797086 Other lineage4.9 None
ERR4596910 Sensitive lineage4 None
ERR473323 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4769514 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769555 Other La1.3 None
ERR4810624 HR-TB lineage2.2 None
ERR6359066 HR-TB lineage4 None
ERR5865408 Pre-XDR-TB lineage2.2.1 None
ERR6358951 HR-TB lineage4 None
ERR9117704 Other lineage4.6 None
ERR6359074 HR-TB lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR736837 Other lineage4.9 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
ERR9119669 HR-TB None
SRR1062928 RR-TB lineage4 None
SRR1173740 Other None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140736 RR-TB None
SRR11462861 Other La1.8.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172717 Other lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175506 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175513 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181214 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR19303820 RR-TB lineage4.8 None
SRR20632814 Sensitive lineage4 None
SRR21677886 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
ERR4814639 HR-TB lineage4 None
ERR161039 Sensitive lineage4.3.4 None
ERR181744 HR-TB None
ERR4816964 Other lineage4.9 None
ERR4815471 Other lineage4.9 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4816198 Sensitive lineage4.1.3 None
ERR212123 Other None
ERR212033 HR-TB None
ERR212034 HR-TB None
ERR4816470 Other lineage3 None
ERR4816762 Other lineage4;lineage2 None
ERR2229198 MDR-TB lineage4.8 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5007204 Other lineage4.1.2.1 None
SRR4035835 Sensitive lineage4.1.2 None
ERR4818561 HR-TB lineage4 None
ERR4819383 RR-TB lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4819357 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR1035138 MDR-TB None