EBG00000313339 - n.41G>A
Drug resistance types
51 Sensitive
12 RR-TB
33 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| 11 | |
| lineage4 | 19 |
| lineage4.9 | 75 |
| lineage4.1.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage3 | 4 |
| lineage4.8 | 9 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.3.3 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 8 |
| lineage4.2.1 | 4 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.7 | 1 |
| lineage4.6.1.1 | 2 |
| La1.3 | 4 |
| lineage2.2 | 2 |
| lineage4.6 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.2.2.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 170 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR161039 | Sensitive | lineage4.3.4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR181744 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816964 | Other | lineage4.9 | None | ERR212034 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR212123 | Other | None | ERR4816470 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | SRR4035835 | Sensitive | lineage4.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR1035138 | MDR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046497 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR8217918 | HR-TB | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7496471 | Sensitive | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR3283025 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR5865408 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR736837 | Other | lineage4.9 | None | ERR9117704 | Other | lineage4.6 | None | ERR9119669 | HR-TB | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140736 | RR-TB | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None |
|---|
