EBG00000313339 - n.2377C>T
Drug resistance types
20 Sensitive
10 RR-TB
32 HR-TB
13 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 3 |
| lineage2.2.1 | 10 |
| 22 | |
| lineage4.3.4 | 1 |
| lineage4 | 12 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage6 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage3 | 2 |
| lineage4.9 | 20 |
| lineage2.2.1.1 | 4 |
| lineage4.1.2.1 | 6 |
| lineage4.2.2.1 | 1 |
| La2 | 1 |
| La1.8.1 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.8 | 2 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.2.1 | 1 |
| La1 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117679 | Sensitive | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9125347 | Sensitive | lineage1.2.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173740 | Other | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR13888750 | Other | La2 | None | ERR176778 | HR-TB | None | SRR1792022 | Other | La1.8.1 | None | SRR16058039 | Sensitive | lineage1.2.1.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR1750943 | Sensitive | lineage4 | None | ERR176779 | HR-TB | None | ERR1750908 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR181887 | HR-TB | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816417 | Other | lineage4.9 | None | ERR212121 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR751686 | Sensitive | lineage2.2.1 | th | ERR2513273 | Other | lineage4.1.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818388 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | ERR1063858 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046397 | Other | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR294266 | HR-TB | None | ERR323045 | HR-TB | None | ERR036207 | Other | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769408 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769521 | HR-TB | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None |
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