EBG00000313325 - n.1319C>A
Drug resistance types
22 Sensitive
28 RR-TB
22 HR-TB
27 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
194 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 23 |
| lineage4.3 | 1 |
| La1.8.1 | 4 |
| lineage4.6.1.1 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.3.3 | 15 |
| lineage2.2.1 | 37 |
| La1.8.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1 | 4 |
| lineage2.2.2 | 5 |
| lineage4.9 | 44 |
| lineage4 | 13 |
| lineage4.1.2.1 | 17 |
| 7 | |
| lineage4.1.4 | 4 |
| lineage4.3.4.2 | 4 |
| lineage1.1.3.2 | 3 |
| lineage4.1.2 | 6 |
| La1.3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3 | 26 |
| lineage1.1.1.1 | 1 |
| La1.2 | 2 |
| lineage1.1.1 | 3 |
| lineage3.1.2 | 4 |
| lineage1.2.2.2 | 6 |
| lineage4.6.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4.3.4.2.1 | 4 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.9;lineage2.2 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage2.2.1.1 | 3 |
| La1.7.1 | 2 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.1.1.3 | 2 |
| La1.4 | 1 |
| lineage4.5 | 2 |
| lineage4.9.1 | 1 |
| lineage1.1.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage3.1.1 | 4 |
| lineage4.6.2.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.1 | 6 |
| lineage4.4.1.1 | 3 |
| lineage1.1.2 | 8 |
| La3 | 2 |
| lineage4.1.3 | 3 |
| lineage4.6.3 | 1 |
| lineage4.7 | 2 |
| lineage4.8.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.2.2.1 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 315 |
Geographic prevalence
Country level data for this variant is available for 26 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131123 | Other | lineage4.8 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR8600229 | Other | La1.8.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7645900 | Sensitive | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7851307 | Other | La1.8.2 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR184932 | Other | lineage2.2.1 | None | ERR1034722 | Other | lineage4.9 | None | ERR036215 | Other | lineage4.8 | None | ERR1023527 | RR-TB | lineage4 | None | ERR024351 | MDR-TB | lineage2.2.1 | None | ERR10796557 | Other | lineage4 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR1144990 | Other | lineage4.8 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769429 | Other | lineage4.9 | None | ERR4132447 | HR-TB | lineage4 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR473337 | Other | lineage4.1.2 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR4797451 | MDR-TB | lineage4.3.3 | in | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR5865302 | Pre-XDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR5987219 | Pre-XDR-TB | lineage2.2.2 | None | ERR6198389 | Other | La1.2 | None | ERR6201802 | Other | La1.2 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | ERR751865 | Other | lineage1.1.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117728 | Other | lineage3 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1106670 | Other | lineage4.9 | None | SRR1140942 | Other | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1159158 | Other | lineage2.2.1 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR1173025 | Other | lineage4.9 | None | SRR1172808 | Other | lineage4.9 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1173074 | Other | lineage4.9 | None | SRR1196557 | HR-TB | lineage4.9;lineage2.2 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183958 | Other | lineage2.2.1 | None | SRR1184379 | Other | lineage4 | None | SRR1196582 | Other | lineage4.9 | None | SRR12882631 | Other | lineage3.1.2.1 | None | SRR11972311 | Pre-XDR-TB | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR13199746 | Other | La1.7.1 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR3675460 | Sensitive | lineage4.1.1.3 | None | SRR13861727 | Other | lineage4.9 | None | SRR16278292 | Other | La1.4 | None | SRR1792140 | Other | La1.8.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR4815684 | Other | lineage5.1.4 | gb | ERR4815265 | Other | lineage2.2.1 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815336 | Other | lineage4.6.2.2 | None | ERR4815172 | Other | lineage1.2.2.2 | None | ERR1465883 | Sensitive | lineage4.8 | None | ERR4815197 | Other | lineage4 | None | SAMN02419540 | Other | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815689 | Other | lineage3 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814815 | Other | lineage4.2.1 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4814700 | Other | lineage4.3.3 | None | ERR4814790 | Other | lineage4.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675273 | Sensitive | lineage3 | None | ERR4814912 | HR-TB | lineage4.3.4.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815837 | Other | lineage4.1.4 | gb | ERR4815556 | RR-TB | lineage3 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815886 | Sensitive | lineage4.9 | None | ERR4815832 | Other | lineage3 | None | ERR4816971 | HR-TB | lineage4.3.4.1 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816982 | Other | lineage4 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR2229057 | HR-TB | lineage4 | None | ERR4816051 | MDR-TB | lineage2.2.1 | None | ERR4817463 | Other | La3 | gb | ERR4816118 | Other | lineage4.9 | gb | ERR4817479 | Other | lineage4.1.3 | None | ERR4816177 | Other | lineage4.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4817046 | Other | lineage3 | None | ERR4817478 | Other | lineage3 | None | ERR4816266 | Other | lineage3 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR4817069 | RR-TB | None | ERR4816410 | Other | lineage4.3.3 | gb | ERR4816397 | Other | lineage1.1.2 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4816458 | Other | lineage1.2.2.2 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR4816681 | Other | lineage4.1.2.1 | gb | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817227 | Other | lineage4.9 | gb | ERR4816833 | Other | lineage4.1.1.3 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228822 | Other | lineage4.9 | None | ERR4816883 | Other | lineage4.5 | None | ERR2228873 | Other | lineage4.8 | None | ERR552656 | Sensitive | lineage4.8 | de | ERR4817703 | Other | lineage1.1.1 | None | ERR2228888 | Other | lineage4.8 | None | ERR4817310 | Other | lineage4.9 | None | ERR4817795 | Other | lineage4.7 | gb | ERR4817710 | Other | lineage1.1.2 | None | ERR4817836 | Sensitive | lineage1.1.2 | None | ERR4818274 | Other | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4817958 | Other | lineage4.2.1 | None | ERR4818008 | Other | lineage4.3.3 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4818179 | Other | lineage4.1.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4817917 | Other | lineage2.2.1 | None | ERR4817948 | Other | lineage3 | gb | ERR4819012 | Other | lineage1.1.2 | None | ERR4817987 | Other | lineage4.7 | None | ERR4818449 | Other | lineage4.3.3 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818471 | Other | lineage2.2.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4819683 | Other | lineage4.1.4 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR4820209 | HR-TB | lineage4.1.2 | None | ERR4819217 | Other | lineage1.2.2.2 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SRR5341423 | Other | lineage1.1.2 | None | ERR4819525 | Other | lineage3 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819679 | Other | lineage3 | None | ERR4819131 | Other | lineage4 | None | ERR2513711 | Sensitive | lineage1.2.2.2 | gb | SRR5341375 | Other | lineage4.9 | None | ERR4820247 | HR-TB | lineage4.9 | None | ERR4819206 | Other | lineage4.8 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SRR5341396 | Other | lineage4 | None | SRR5341407 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820787 | Other | lineage3.1.1 | gb | ERR4820467 | Other | lineage4.8 | gb | ERR4820503 | Other | lineage2.2.1 | None | ERR4819834 | Other | lineage4.8 | gb | ERR4820570 | Sensitive | lineage3.1.1 | gb | ERR4820030 | Other | lineage4.9 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4819962 | Other | lineage4.4.1.1 | None | ERR4820020 | Sensitive | lineage2.2.1 | None | ERR4820060 | Other | lineage4.3.3 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR4820666 | Other | lineage4.8 | gb | ERR4820187 | Other | lineage4.3.3 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4820679 | Other | lineage4.8 | None | ERR2747678 | Other | La1.8.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821175 | Other | lineage2.2.1.1 | gb | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | ERR4821908 | Other | lineage4.8 | None | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821368 | Other | lineage1.1.1 | None | ERR4822066 | HR-TB | lineage4.1.2.1 | None | ERR4821413 | Other | La3 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4821538 | Other | lineage3 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821530 | HR-TB | lineage4.3.4.1 | None | ERR4822280 | Other | lineage4.1.3 | None | ERR4822171 | Other | lineage3 | gb | ERR4821561 | HR-TB | lineage4.6.2.2 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6044830 | Other | lineage4.9 | None | SRR6045744 | Other | lineage3.1.2 | None | SRR6044884 | Other | lineage3.1.1 | gb | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045925 | Other | lineage4.2 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6046246 | Other | lineage3 | None | SRR6045992 | Other | lineage3 | None | SRR6046015 | Other | lineage4.9 | None | SRR6046208 | Other | lineage4 | None | ERR2851371 | Other | lineage4.9 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6046607 | Other | lineage3 | None | SRR6046517 | Other | lineage4.8 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR6153042 | Other | lineage4.4.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981966 | Other | lineage2.2.1 | None |
|---|
