EBG00000313325 - n.1319C>A
Drug resistance types
14 Sensitive
16 RR-TB
10 HR-TB
15 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
98 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 5 |
| lineage4.4.1.1 | 2 |
| lineage4.9 | 34 |
| lineage2.2.1 | 20 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| lineage3 | 11 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 13 |
| lineage4.2.1 | 1 |
| La1.2 | 2 |
| lineage1.2.2.2 | 2 |
| La1.6 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage2.2.2 | 5 |
| lineage4.3.3 | 6 |
| La1.8.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2 | 2 |
| La1.8.1 | 5 |
| lineage4.2.2.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage1.1.3.2 | 3 |
| La1.3 | 1 |
| La1.7.1 | 1 |
| 1 | |
| lineage4.1.4 | 1 |
| lineage4.3 | 1 |
| La1.8.1;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage4.1.3 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342683 | Other | lineage4.1.2 | None | SRR6153042 | Other | lineage4.4.1.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR1034722 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR13591410 | Other | lineage4.9 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4769429 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5341407 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR867555 | Other | lineage3 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | SRR1141261 | Sensitive | lineage4.9 | None | ERR1023527 | Other | lineage4.9.1 | None | SRR1140716 | Other | lineage3 | None | SRR1183080 | Other | lineage4.9 | None | ERR4816429 | Other | lineage1.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR1013527 | Other | lineage2.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | ERR4821530 | Other | lineage4.3.4.1 | None | ERR2229358 | Other | lineage4.8 | None | SRR1062864 | Sensitive | lineage4.9 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | ERR6198389 | Other | La1.2 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1173521 | Other | lineage4.9 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR1183276 | Other | lineage4.9 | None | SRR1184379 | Other | lineage2.2.2;lineage4.9 | None | ERR5987219 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR7851307 | Other | La1.8.2 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | SRR19612366 | Other | lineage4.5 | None | SRR1180252 | Other | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR1144990 | Other | lineage4.8 | None | SRR7240148 | Other | La1.8.1 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR6201802 | Other | La1.2 | None | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820060 | Other | lineage4.3.3 | None | ERR4820107 | Other | lineage1.2.1.2.1 | None | ERR4815832 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR552656 | Sensitive | lineage4.8 | de | SRR1196582 | Other | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR751865 | Other | lineage1.1.1 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR1019127 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | SRR1792140 | Other | La1.8.1 | None | SRR1106670 | Sensitive | lineage4.9 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR1144989 | Sensitive | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | SRR7240448 | Other | La1.8.1 | None | SRR1238558 | Other | lineage4.9 | None | SRR13199746 | Other | La1.7.1 | None | SRR1181245 | Other | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR473337 | Other | lineage4.1.2 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819206 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | SRR6046246 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR7131123 | Other | lineage4.8 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | SRR1184383 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR1181161 | Other | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | SRR16278292 | Other | La1.4 | None | ERR2660524 | HR-TB | lineage1.1.3.2 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4822085 | Other | lineage4.8 | gb | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR1173025 | Other | lineage4.9 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR2228873 | Other | lineage4.8 | None | SRR6982494 | Other | lineage2.2.2 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR987733 | Other | lineage4.6.1.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR2228888 | Other | lineage4.8 | None | SRR1172808 | Other | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR1465883 | Sensitive | lineage4.8 | None | SRR1013531 | Sensitive | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1183709 | Other | lineage4.9 | None | ERR4814930 | Other | lineage4.4.1.1 | None | SRR1062865 | Sensitive | lineage2.2.2 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR036215 | Other | lineage4.8 | None | SRR5341417 | HR-TB | lineage3 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1062918 | Other | lineage3 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SRR7236372 | Other | La1.8.1 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR12882631 | Other | lineage3.1.2.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | ERR4820679 | Other | lineage4.8 | None | SRR5341375 | Other | lineage4.9 | None | SAMN02419540 | Other | lineage2.2.1 | None | SRR7236216 | Other | La1.8.1 | None |
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