EBG00000313339 - n.2040C>T
Drug resistance types
5 Sensitive
12 RR-TB
1 HR-TB
12 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 4 |
| lineage4.9 | 12 |
| lineage2.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.2.1 | 6 |
| La1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3 | 6 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4 | 1 |
| La1.6 | 1 |
| 2 | |
| lineage4.6.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798060 | Sensitive | lineage1.1.2 | in | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4796720 | Sensitive | lineage1.1.2 | in | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | DRR184932 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971086 | MDR-TB | lineage4.1.1.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR3273159 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769418 | Other | La1.2 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140736 | RR-TB | None | SRR1173740 | Other | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | ERR4815778 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173834 | Other | lineage4.6.1.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | SRR3105776 | Pre-XDR-TB | lineage1.1.2 | None | ERR4815490 | Other | lineage3 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR4819224 | Other | lineage1.2.1.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4816493 | Other | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819281 | Sensitive | lineage1.1.2 | None | ERR4821172 | RR-TB | lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820614 | Other | lineage3.1.2 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None |
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